🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

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Raktima Raychowdhury

Raktima Raychowdhury

Broad Institute

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection”.

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection

Genome Research(2018)10.1101/gr.240390.118

N/A

2.3DataRank · unranked

78 citations

Jenny Chen, Rachel E. Gate, Meena Subramaniam, Tushar Bhangale, Mark N. Lee +18 more

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Nature Biotechnology(2011)10.1038/nbt.1883

N/A

1.5DataRank · unranked

22458 citations

Brian J. Haas, Moran Yassour, Joshua Z. Levin, Ido Amit, Xian Adiconis +19 more

A single-cell survey of the small intestinal epithelium

Nature(2017)10.1038/nature24489

N/A

1.1DataRank · unranked

1850 citations

Moshe Biton, Noga Rogel, Rebecca H. Herbst, Karthik Shekhar, Indresh Singh +18 more

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

Nature(2013)10.1038/nature12172

N/A

1.1DataRank · unranked

1301 citations

Rahul Satija, Xian Adiconis, Rona S. Gertner, Jellert T. Gaublomme, Raktima Raychowdhury +14 more

An Integrative Framework Reveals Signaling-to-Transcription Events in Toll-like Receptor Signaling

Cell Reports(2017)10.1016/j.celrep.2017.06.016

N/A

1.1DataRank · unranked

31 citations

Dariusz Przybylski, Nir Yosef, Jana W Qiao, Raktima Raychowdhury, Tanja Maritzen +10 more

Dynamic profiling of the protein life cycle in response to pathogens

Science(2015)10.1126/science.1259038

N/A

0.926DataRank · unranked

478 citations

Michael S. Rooney, Philipp Mertins, Dariusz Przybylski, Nicolas Chevrier, Rahul Satija +15 more

A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks

Cell(2015)10.1016/j.cell.2015.06.059

N/A

0.918DataRank · unranked

455 citations

Marko Jovanovic, Rebecca H. Herbst, Atray Dixit, Chun Jimmie Ye, Dariusz Przybylski +13 more

Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.23.525198

N/A

0.836DataRank · unranked

23 citations

Basak Eraslan, Olena Kuksenko, Kushal K. Dey, Karthik A. Jagadeesh, Pratiksha I. Thakore +18 more

Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli

Nature Biotechnology(2013)10.1038/nbt.2519

N/A

0.554DataRank · unranked

37 citations

Nicolas Chevrier, Roni Wilentzik, Thomas Eisenhaure, Raktima Raychowdhury, Yael Steuerman +6 more

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/188961

N/A

0.104DataRank · unranked

1 citations

Jenny Chen, Rachel E. Gate, Meena Subramaniam, Tushar Bhangale, Mark N. Lee +18 more

Loss of the Nuclear Protein RTF2 Enhances Influenza Virus Replication

Journal of Virology(2020)10.1128/jvi.00319-20

N/A

0DataRank · unranked

10 citations

Bo Li, Ang Cui, Thomas Eisenhaure, Raktima Raychowdhury, David Lieb +2 more

IRF3 inhibits IFN-γ-mediated restriction of intracellular pathogens in macrophages independently of IFNAR

Journal of Leukocyte Biology(2021)10.1002/jlb.3a0218-069rr

N/A

0DataRank · unranked

11 citations

Raktima Raychowdhury, Karen Smith, Alexis M. Schneider, Jörn Coers, Maxwell R. Mumbach +3 more