Ljiljana Paša‐Tolić

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

4.4Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An atlas of healthy and injured cell states and niches in the human kidney

Nature(2023)10.1038/s41586-023-05769-3

Top 5%

4.4DataRank

Top 5%663 citations

Rajasree Menon, Seth Winfree, Qiwen Hu, Ricardo Melo Ferreira, Kian Kalhor +95 more

Papers

Driven by 48 papers — median percentile 95. Top paper: “An atlas of healthy and injured cell states and niches in the human kidney”.

An atlas of healthy and injured cell states and niches in the human kidney

Nature(2023)10.1038/s41586-023-05769-3

Top 5%

4.4DataRank

Top 5%663 citations

Rajasree Menon, Seth Winfree, Qiwen Hu, Ricardo Melo Ferreira, Kian Kalhor +95 more

Parallel measurement of transcriptomes and proteomes from same single cells using nanodroplet splitting

Nature Communications(2024)10.1038/s41467-024-54099-z

N/A

1.0DataRank · unranked

46 citations

Lye Meng Markillie, Hugh Mitchell, Sarah Williams, Kristin Engbrecht, David J. Degnan +10 more

Response Surface Methodology As a New Approach for Finding Optimal MALDI Matrix Spraying Parameters for Mass Spectrometry Imaging

Journal of the American Society for Mass Spectrometry(2020)10.1021/jasms.9b00074

N/A

0DataRank · unranked

35 citations

Guanshi Zhang, Dejan Bezbradica, Arunima Bhattacharjee, Ljiljana Paša‐Tolić, Kumar Sharma +4 more

The Human Proteoform Project: A Plan to Define the Human Proteome

Preprints.org(2020)10.20944/preprints202010.0368.v1

N/A

0DataRank · unranked

15 citations

Jeffrey N. Agar, Julia Chamot‐Rooke, Paul O. Danis, Ying Ge, Joseph A. Loo +4 more

Activation of the plant mevalonate pathway by extracellular ATP

Research Square(2020)10.21203/rs.3.rs-61470/v1

N/A

0DataRank · unranked

7 citations

Katalin Tóth, Daewon Kim, Phuc H. Vo, Chung-Ho Lin, Pubudu Handakumbura +5 more

The Human Proteoform Project: Defining the human proteome

Science Advances(2021)10.1126/sciadv.abk0734

N/A

0DataRank · unranked

244 citations

Jeffrey N. Agar, Julia Chamot‐Rooke, Paul O. Danis, Ying Ge, Joseph A. Loo +4 more

High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

Nature Communications(2021)10.1038/s41467-021-26514-2

N/A

0DataRank · unranked

197 citations

Sarah Williams, Lye Meng Markillie, Song Feng, Chia‐Feng Tsai, Victor Aguilera-Vazquez +12 more

New Insights Into Lignification via Network and Multi-Omics Analyses of Arogenate Dehydratase Knock-Out Mutants in Arabidopsis thaliana

Frontiers in Plant Science(2021)10.3389/fpls.2021.664250

N/A

0DataRank · unranked

5 citations

Joaquim V. Marques, Jason Wendler, Jason McDermott, Karl Weitz, Therese RW Clauss +9 more

High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.17.431689

N/A

0DataRank · unranked

28 citations

Sarah Williams, Victor Aguilera-Vazquez, Ryan Sontag, Ronald Moore, Lye Meng Markillie +8 more

Author Correction: High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

Nature Communications(2021)10.1038/s41467-021-27110-0

N/A

0DataRank · unranked

10 citations

Sarah Williams, Lye Meng Markillie, Song Feng, Chia‐Feng Tsai, Victor Aguilera-Vazquez +12 more

Robust, sensitive, and quantitative single-cell proteomics based on ion mobility filtering

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.30.428333

N/A

0DataRank · unranked

3 citations

Gérémy Clair, Sarah Williams, Song Feng, Chia‐Feng Tsai, Ronald Moore +7 more

Three-dimensional feature matching improves coverage for single-cell proteomics based on ion mobility filtering

Cell Systems(2022)10.1016/j.cels.2022.02.003

N/A

0DataRank · unranked

93 citations

Gérémy Clair, Sarah Williams, Song Feng, Chia‐Feng Tsai, Ronald Moore +7 more

Activation of the plant mevalonate pathway by extracellular ATP

Nature Communications(2022)10.1038/s41467-022-28150-w

N/A

0DataRank · unranked

69 citations

Katalin Tóth, Daewon Kim, Phuc H. Vo, Chung-Ho Lin, Pubudu Handakumbura +5 more

Enhanced Spatial Mapping of Histone Proteoforms in Human Kidney Through MALDI-MSI by High-Field UHMR-Orbitrap Detection

Analytical Chemistry(2022)10.1021/acs.analchem.2c01034

N/A

0DataRank · unranked

38 citations

Dušan Veličković, William Kew, Kyle L. Fort, Maria Reinhardt-Szyba, Annapurna Pamreddy +7 more

First comprehensive identification of cardiac proteins with putative increased O-GlcNAc levels during pressure overload hypertrophy

PLoS ONE(2022)10.1371/journal.pone.0276285

N/A

0DataRank · unranked

19 citations

Teresa A. Palazzo, Mowei Zhou, Dolena Ledee, Olson, Heather M., Ljiljana Paša‐Tolić +2 more

Enhanced Spatial Mapping of Histone Proteoforms in Human Kidney Through MALDI-MSI by High-Field UHMR Orbitrap Detection

ChemRxiv(2022)10.26434/chemrxiv-2022-mq46m-v2

N/A

0DataRank · unranked

6 citations

Dušan Veličković, William Kew, Kyle L. Fort, Maria Reinhardt-Szyba, Annapurna Pamreddy +7 more

Spatially resolved top-down proteomics of tissue sections based on a microfluidic nanodroplet sample preparation platform

ChemRxiv(2022)10.26434/chemrxiv-2022-pcn8c

N/A

0DataRank · unranked

3 citations

James Fulcher, David J. Degnan, Sarah Williams, Lisa Bramer, Dušan Veličković +8 more

Enhanced Spatial Mapping of Histone Proteoforms in Human Kidney Through MALDI-MSI by High-Field UHMR Orbitrap Detection

ChemRxiv(2022)10.26434/chemrxiv-2022-mq46m

N/A

0DataRank · unranked

2 citations

Dušan Veličković, William Kew, Kyle L. Fort, Maria Reinhardt-Szyba, Annapurna Pamreddy +7 more

Spatially resolved top-down proteomics of tissue sections based on a microfluidic nanodroplet sample preparation platform

ChemRxiv(2022)10.26434/chemrxiv-2022-pcn8c-v2

N/A

0DataRank · unranked

0 citations

James Fulcher, David J. Degnan, Sarah Williams, Lisa Bramer, Dušan Veličković +8 more

Spatially Resolved Top-Down Proteomics of Tissue Sections Based on a Microfluidic Nanodroplet Sample Preparation Platform

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2022.100491

N/A

0DataRank · unranked

27 citations

James Fulcher, David J. Degnan, Sarah M. Williams, Lisa Bramer, Dušan Veličković +8 more

Spatial Proteomics toward Subcellular Resolution by Coupling Deep Ultraviolet Laser Ablation with Nanodroplet Sample Preparation

ACS Measurement Science Au(2023)10.1021/acsmeasuresciau.3c00033

N/A

0DataRank · unranked

25 citations

Andrey Liyu, Yu Mi Kwon, Dehong Hu, Sarah Williams, Dušan Veličković +5 more

IsoMatchMS : Open-Source Software for Automated Annotation and Visualization of High Resolution MALDI-MS Spectra

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.3c00180

N/A

0DataRank · unranked

6 citations

Kevin Zemaitis, L.A. Lewis, Lee Ann McCue, Lisa Bramer, James Fulcher +4 more

193 nm Ultraviolet Photodissociation for the Characterization of Singly Charged Proteoforms Generated by MALDI

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.2c00302

N/A

0DataRank · unranked

4 citations

Mowei Zhou, William Kew, Ljiljana Paša‐Tolić, Kevin Zemaitis

IsoMatchMS: Open-Source Software for Automated Annotation and Visualization of High Resolution MALDI-MS Spectra

ChemRxiv(2023)10.26434/chemrxiv-2023-tv0c3

N/A

0DataRank · unranked

2 citations

Kevin Zemaitis, Logan T. Lewis, Lee Ann McCue, Lisa Bramer, James Fulcher +4 more

Top-down mass spectrometry of native proteoforms and their complexes: A community study

Research Square(2023)10.21203/rs.3.rs-3228472/v1

N/A

0DataRank · unranked

2 citations

Tanja Habeck, Kyle A. Brown, Benjamin J. Des Soye, Carter Lantz, Mowei Zhou +17 more

193 nm ultraviolet photodissociation for the characterization of singly charged proteoforms generated by MALDI

ChemRxiv(2023)10.26434/chemrxiv-2022-rctz4-v2

N/A

0DataRank · unranked

0 citations

Mowei Zhou, William Kew, Ljiljana Paša‐Tolić, Kevin Zemaitis

The Human Proteoform Project: Defining the human proteome

Zenodo (CERN European Organization for Nuclear Research)(2023)10.1126/sciadv.abk07

N/A

0DataRank · unranked

0 citations

Jeffrey N. Agar, Julia Chamot‐Rooke, Paul O. Danis, Ying Ge, Joseph A. Loo +5 more

Top-down proteomics

Nature Reviews Methods Primers(2024)10.1038/s43586-024-00318-2

N/A

0DataRank · unranked

126 citations

Joseph A. Loo, Yury O. Tsybin, Xiaowen Liu, Si Wu, Julia Chamot‐Rooke +5 more

Top-down mass spectrometry of native proteoforms and their complexes: a community study

Nature Methods(2024)10.1038/s41592-024-02279-6

N/A

0DataRank · unranked

39 citations

Kyle A. Brown, Benjamin J. Des Soye, Carter Lantz, Mowei Zhou, Novera Alam +17 more

Leptochelins A–C, Cytotoxic Metallophores Produced by Geographically Dispersed Leptothoe Strains of Marine Cyanobacteria

Journal of the American Chemical Society(2024)10.1021/jacs.4c05399

N/A

0DataRank · unranked

27 citations

Mariana Reis, Christopher C. Thornburg, R. Thomas Williamson, Daniel Petras, Allegra T. Aron +25 more

Advances in mass spectrometry-enabled multiomics at single-cell resolution

Current Opinion in Biotechnology(2024)10.1016/j.copbio.2024.103096

N/A

0DataRank · unranked

12 citations

Kevin Zemaitis, James Fulcher, Ljiljana Paša‐Tolić, Rashmi Kumar

pyMS-Vis, an Open-Source Python Application for Visualizing and Investigating Deconvoluted Top-Down Mass Spectrometric Experiments: A Histone Proteoform Case Study

Analytical Chemistry(2024)10.1021/acs.analchem.4c02650

N/A

0DataRank · unranked

4 citations

Megan S. Bindra, Udayan Das, Sarah R. Rommelfanger, Mowei Zhou, Ljiljana Paša‐Tolić +2 more

Spatial Proteomics towards cellular Resolution

Expert Review of Proteomics(2024)10.1080/14789450.2024.2445809

N/A

0DataRank · unranked

4 citations

James Fulcher, Ljiljana Paša‐Tolić, Weijun Qian, Yu Mi Kwon

Challenges in Spatial Metabolomics and Proteomics for Functional Tissue Unit and Single-Cell Resolution

Seminars in Nephrology(2024)10.1016/j.semnephrol.2025.151583

N/A

0DataRank · unranked

2 citations

Ljiljana Paša‐Tolić, Kevin Zemaitis

Spatial top-down proteomics for the functional characterization of human kidney

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.13.580062

N/A

0DataRank · unranked

3 citations

James Fulcher, Rashmi Kumar, David J. Degnan, L.A. Lewis, Yen‐Chen Liao +9 more

Advances in mass spectrometry-enabled multiomics at single-cell resolution

ChemRxiv(2024)10.26434/chemrxiv-2024-gmw9l

N/A

0DataRank · unranked

1 citations

Kevin Zemaitis, James Fulcher, Ljiljana Paša‐Tolić, Rashmi Kumar

Leptochelins A-C, Cytotoxic Metallophores Produced by Geographically Dispersed Leptothoe Strains of Marine Cyanobacteria

ChemRxiv(2024)10.26434/chemrxiv-2024-nhrn8

N/A

0DataRank · unranked

0 citations

Mariana Reis, Christopher C. Thornburg, Edward C. Sherer, Daniel Petras, Allegra T. Aron +25 more

Identification of remnant OCT media artifacts after tissue washing by MALDI mass spectrometry imaging

ChemRxiv(2024)10.26434/chemrxiv-2024-m536q

N/A

0DataRank · unranked

0 citations

Rashmi Kumar, Marija Veličković, Dušan Veličković, Weijun Qian, Ljiljana Paša‐Tolić +1 more

Discovery of Proteoforms Associated With Alzheimer's Disease Through Quantitative Top-Down Proteomics

Molecular & Cellular Proteomics(2025)10.1016/j.mcpro.2025.100983

N/A

0DataRank · unranked

20 citations

Ashley N. Ives, Shinya Tasaki, Shane S. Kelly, Sarah Williams, Thomas Fillmore +10 more

A needed nomenclature for nucleosomes

Molecular Cell(2025)10.1016/j.molcel.2025.08.029

N/A

0DataRank · unranked

12 citations

Geneviève Almouzni, Andrew J. Andrews, Karim-Jean Armache, C.H. Arrowsmith, Sung Hee Baek +33 more

Spatial top-down proteomics for the functional characterization of human kidney

Clinical Proteomics(2025)10.1186/s12014-025-09531-x

N/A

0DataRank · unranked

9 citations

James Fulcher, Rashmi Kumar, David J. Degnan, L.A. Lewis, Yen‐Chen Liao +9 more

Identifying Receptor Kinase Substrates Using an 8000 Peptide Kinase Client Library Enriched for Conserved Phosphorylation Sites

Molecular & Cellular Proteomics(2025)10.1016/j.mcpro.2025.100926

N/A

0DataRank · unranked

5 citations

Gabriel Lemes Jorge, Chunhui Xu, Lingtao Su, Sung‐Hwan Cho, Nagib Ahsan +11 more

Characterization of Cytokine Treatment on Human Pancreatic Islets by Top‐Down Proteomics

PROTEOMICS(2025)10.1002/pmic.70044

N/A

0DataRank · unranked

2 citations

Tyler J. Sagendorf, Lorenz Nierves, Tai‐Tu Lin, Ercument Dirice, Rohit Kulkarni +4 more

Global analysis of membrane protein S-acylation in the model plant Arabidopsis thaliana

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.01.658617

N/A

0DataRank · unranked

1 citations

Lingtao Su, Mowei Zhou, Marina A. Gritsenko, Jinrong Wan, Yan Ma +5 more

Characterization of cytokine treatment on human pancreatic islets by top-down proteomics

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.12.653562

N/A

0DataRank · unranked

0 citations

Tyler J. Sagendorf, Lorenz Nierves, Tai‐Tu Lin, Ercument Dirice, Rohit Kulkarni +4 more

Higher-order structural characterisation of native proteins and complexes by top-down mass spectrometry

Chemical Science(2020)10.1039/d0sc04392c

N/A

0DataRank · unranked

157 citations

Carter Lantz, Kyle A. Brown, Ying Ge, Ljiljana Paša‐Tolić, Joseph A. Loo +2 more

Oligomeric assemblies of plant biotin carboxylase revealed by cryo-EM and cross-linking

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.30.697075

N/A

0DataRank · unranked

0 citations

Luke Dunn, Youngki You, Gabriel Lemes Jorge, Ljiljana Paša‐Tolić, Jay J. Thelen +3 more

Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry

Journal of the American Society for Mass Spectrometry(2020)10.1021/jasms.0c00036

N/A

0DataRank · unranked

128 citations

Luca Fornelli, Yury O. Tsybin, Joseph A. Loo, Henrique S. Seckler, Jeffrey N. Agar +55 more

Ljiljana Paša‐Tolić

Indexed papers

Top data-sharing exemplar

Papers