Thomas Bonacci

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 19 papers. Top paper: “Dissenting degradation: Deubiquitinases in cell cycle and cancer”.

Dissenting degradation: Deubiquitinases in cell cycle and cancer

Seminars in Cancer Biology(2020)10.1016/j.semcancer.2020.03.008

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0DataRank · unranked

125 citations

Michael J. Emanuele, Thomas Bonacci

In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators

PLoS Biology(2020)10.1371/journal.pbio.3000975

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0DataRank · unranked

21 citations

Raquel C. Martinez‐Chacin, Xianxi Wang, Rochelle L. Tiedemann, Thomas Bonacci, Rajarshi Choudhury +13 more

In silico APC/C substrate discovery reveals cell cycle degradation of chromatin regulators including UHRF1

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.09.033621

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0DataRank · unranked

1 citations

Raquel C. Martinez‐Chacin, Xianxi Wang, Rochelle L. Tiedemann, Thomas Bonacci, Rajarshi Choudhury +11 more

Functional conservation and divergence of the helix‐turn‐helix motif of E2 ubiquitin‐conjugating enzymes

The EMBO Journal(2021)10.15252/embj.2021108823

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0DataRank · unranked

15 citations

Derek L. Bolhuis, Anneroos E Nederstigt, Joshua A. Boyer, Brenda Temple, Thomas Bonacci +9 more

Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C)

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01105-5

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0DataRank · unranked

18 citations

Kaeli A. Welsh, Derek L. Bolhuis, Ethan Paulаkonis, Raquel C. Martinez‐Chacin, Bei Liu +16 more

Proteomic Analysis Reveals a PLK1-Dependent G2/M Degradation Program and Links PKA-AKAP2 to Cell Cycle Control

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.11.561963

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0DataRank · unranked

1 citations

Carolyn Hsu, Thomas Bonacci, Derek L. Bolhuis, Xianxi Wang, Christine A. Mills +8 more

Proteomic analysis reveals a PLK1-dependent G2/M degradation program and a role for AKAP2 in coordinating the mitotic cytoskeleton

Cell Reports(2024)10.1016/j.celrep.2024.114510

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0DataRank · unranked

12 citations

Kimberly Lukasik, Carolyn Hsu, Thomas Bonacci, Derek L. Bolhuis, Xianxi Wang +10 more

Cezanne/OTUD7B is a cell cycle-regulated deubiquitinase that antagonizes the degradation of APC/C substrates

UNC Libraries(2024)10.17615/wx15-j073

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0DataRank · unranked

9 citations

Nicholas G. Brown, Michael J. Emanuele, Thomas Bonacci, Aussie Suzuki, Jeanette Gowen Cook +2 more

Dissenting degradation: Deubiquitinases in cell cycle and cancer

UNC Libraries(2024)10.17615/js9j-d637

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0DataRank · unranked

2 citations

Thomas Bonacci, Michael J. Emanuele

Who guards the guardian? Mechanisms that restrain APC/C during the cell cycle

UNC Libraries(2024)10.17615/xekt-8j86

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0DataRank · unranked

1 citations

Michael J. Emanuele, Jennifer L. Kernan, Thomas Bonacci

Mechanisms of USP18 deISGylation revealed by comparative analysis with its human paralog USP41

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.28.596309

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0DataRank · unranked

1 citations

Derek L. Bolhuis, Nicholas G. Brown, Michael J. Emanuele, Thomas Bonacci

Functional conservation and divergence of the helix-turn-helix motif of E2 ubiquitin-conjugating enzymes

UNC Libraries(2024)10.17615/s94d-5j87

N/A

0DataRank · unranked

0 citations

Brenda Temple, Joshua P. Steimel, Li H. Gu, Anneroos E Nederstigt, Nicholas G. Brown +9 more

Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C)

UNC Libraries(2024)10.17615/xm7a-6j77

N/A

0DataRank · unranked

0 citations

Thomas Bonacci, Liying Cui, Sascha Josef Amann, William Zhang, Kaeli A. Welsh +16 more

Ubiquitin chain-elongating enzyme UBE2S activates the RING E3 ligase APC/C for substrate priming

UNC Libraries(2024)10.17615/5fdn-2z74

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0DataRank · unranked

0 citations

Tatyana Bodrug, Morgan E. Gibbs, Jan‐Michael Peters, Michael J. Emanuele, Jeanette Gowen Cook +10 more

USP37 prevents unscheduled replisome unloading through MCM complex deubiquitination

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.03.610997

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0DataRank · unranked

0 citations

Dalia Fleifel, Thomas Bonacci, Xianxi Wang, Brandon L. Mouery, Jeanette Gowen Cook +3 more

Proteomic analysis reveals a PLK1-dependent G2/M degradation program and a role for AKAP2 in coordinating the mitotic cytoskeleton

UNC Libraries(2024)10.17615/jj32-v329

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0DataRank · unranked

0 citations

Derek L. Bolhuis, Xianxi Wang, Ryan D. Mouery, E Drew Toomer, Timothy B. Branigan +10 more

USP37 prevents unscheduled replisome unloading through MCM complex deubiquitination

Nature Communications(2025)10.1038/s41467-025-59770-7

N/A

0DataRank · unranked

5 citations

Dalia Fleifel, Thomas Bonacci, Xianxi Wang, Brandon L. Mouery, Jeanette Gowen Cook +3 more

Mechanisms of USP18 specificity toward ISG15 revealed by paralog sequence analysis comparison

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110288

N/A

0DataRank · unranked

2 citations

Derek L. Bolhuis, Nicholas G. Brown, Michael J. Emanuele, Thomas Bonacci

DIG-DUBs: mechanisms and functions of ISG15 deconjugation by human and viral cross-reactive ubiquitin proteases

Biochemical Society Transactions(2025)10.1042/bst20240859

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0DataRank · unranked

1 citations

Michael J. Emanuele, Thomas Bonacci