Ilya N. Shindyalov

San Diego Supercomputer Center

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

9.4Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Protein Data Bank, 1999–

International Tables for Crystallography(2006)10.1107/97809553602060000722

Top 4%

5.6DataRank

Top 4%145 citations

T. N. Bhat, Helen M. Berman, John Westbrook, Zukang Feng, Gary L. Gilliland +4 more

Papers

Driven by 20 papers — median percentile 74. Top paper: “CE-MC: a multiple protein structure alignment server”.

CE-MC: a multiple protein structure alignment server

Nucleic Acids Research(2004)10.1093/nar/gkh464

N/A

6.6DataRank · unranked

114 citations

S. Lu, Chittibabu Guda, Shan Lu, Eric D. Scheeff, Philip E. Bourne +1 more

The Protein Data Bank, 1999–

International Tables for Crystallography(2006)10.1107/97809553602060000722

Top 4%

5.6DataRank

Top 4%145 citations

T. N. Bhat, Helen M. Berman, John Westbrook, Zukang Feng, Gary L. Gilliland +4 more

An alternative view of protein fold space

Proteins: Structure, Function, and Genetics(2000)10.1002/(sici)1097-0134(20000215)38:3<247::aid-prot2>3.0.co;2-t

N/A

5.3DataRank · unranked

93 citations

Philip E. Bourne, Ilya N. Shindyalov

A NEW ALGORITHM FOR THE ALIGNMENT OF MULTIPLE PROTEIN STRUCTURES USING MONTE CARLO OPTIMIZATION

Biocomputing 2001(2000)10.1142/9789814447362_0028

N/A

4.5DataRank · unranked

57 citations

Chittibabu Guda, Eric D. Scheeff, Philip E. Bourne, Ilya N. Shindyalov

Partitioning Protein Structures into Domains: Why Is it so Difficult?

Journal of Molecular Biology(2006)10.1016/j.jmb.2006.05.060

N/A

4.5DataRank · unranked

93 citations

Stella Veretnik, Ilya N. Shindyalov, Philip E. Bourne, Timothy A. Holland

Toward Consistent Assignment of Structural Domains in Proteins

Journal of Molecular Biology(2004)10.1016/j.jmb.2004.03.053

N/A

3.7DataRank · unranked

68 citations

Philip E. Bourne, Nickolai N Alexandrov, Ilya N. Shindyalov, Nickolai Alexandrov, Stella Veretnik

Conserved key amino acid positions (CKAAPs) derived from the analysis of common substructures in proteins

Proteins: Structure, Function, and Genetics(2000)10.1002/1097-0134(20010201)42:2<148::aid-prot20>3.0.co;2-r

N/A

2.3DataRank · unranked

39 citations

Wilfred W. Li, Ilya N. Shindyalov, Philip E. Bourne, Boojala Vijay B. Reddy, Boojala V. B. Reddy

Structure Comparison and Alignment

Methods of Biochemical Analysis(2003)10.1002/0471721204.ch16

N/A

1.8DataRank · unranked

34 citations

Ilya N. Shindyalov, Philip E. Bourne

Assigning new GO annotations to protein data bank sequences by combining structure and sequence homology

Proteins: Structure, Function, and Bioinformatics(2005)10.1002/prot.20355

Top 13%

1.6DataRank

Top 13%22 citations

Philip E. Bourne, Ilya N. Shindyalov, Julia Ponomarenko

The encyclopedia of life project: Grid software and deployment

New Generation Computing(2004)10.1007/bf03040951

N/A

1.5DataRank · unranked

26 citations

Robert W. Byrnes, Jim Hayes, Adam Birnbaum, Vicente M. Reyes, Atif Shahab +13 more

A comparative proteomics resource: proteins of Arabidopsis thaliana

Genome Biology(2003)10.1186/gb-2003-4-8-r51

Top 15%

1.4DataRank

Top 15%26 citations

Greg B Quinn, Nickolai N Alexandrov, Philip E. Bourne, Ilya N. Shindyalov, Greg Quinn +2 more

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

Protein Engineering Design and Selection(1998)10.1093/protein/11.9.739

N/A

1.1DataRank · unranked

2085 citations

Ilya N. Shindyalov, Philip E. Bourne

Common EF‐hand motifs in cholinesterases and neuroligins suggest a role for Ca2+ binding in cell surface associations

Protein Science(2000)10.1110/ps.9.1.180

N/A

0.596DataRank · unranked

52 citations

T.C. Südhof, Igor F. Tsigelny, Palmer Taylor, Philip E. Bourne, Ilya N. Shindyalov +2 more

Macromolecular Structure Databases: Past Progress and Future Challenges

Acta Crystallographica Section D Biological Crystallography(1998)10.1107/s0907444998009846

Top 38%

0.511DataRank

Top 38%3 citations

Ilya N. Shindyalov, Philip E. Bourne, Helge Weissig

A New Scoring Function and Associated Statistical Significance for Structure Alignment by CE

Journal of Computational Biology(2004)10.1089/1066527042432260

N/A

0.483DataRank · unranked

24 citations

T. Gregory Dewey, Ilya N. Shindyalov, Philip E. Bourne, Yuting Jia

A New Scoring Function and Associated Statistical Significance for Structure Alignment by CE

Journal of Computational Biology(2004)10.1089/cmb.2004.11.787

N/A

0.483DataRank · unranked

24 citations

T. Gregory Dewey, Ilya N. Shindyalov, Philip E. Bourne, Yuting Jia

Protein data representation and query using optimized data decomposition

Bioinformatics(1997)10.1093/bioinformatics/13.5.487

N/A

0.345DataRank · unranked

9 citations

Philip E. Bourne, Ilya N. Shindyalov

A Database of Pairwise Aligned 3-D Structures for the Acetylcholinesterases, Lipases and Other Homologous Proteins

Structure and Function of Cholinesterases and Related Proteins(1998)10.1007/978-1-4899-1540-5_131

Top 62%

0.223DataRank

Top 62%2 citations

Ilya N. Shindyalov, Philip E. Bourne

Design and use of a software framework to obtain information derived from macromolecular structure data

Proceedings of the Twenty-Eighth Annual Hawaii International Conference on System Sciences HICSS-95(1995)10.1109/hicss.1995.375336

N/A

0.208DataRank · unranked

3 citations

W. Chang, J.A. Cooper, Ilya N. Shindyalov, Weider Chang, Juan A. Cooper +1 more

A local macromolecular structure database for crystallographic laboratories

Acta Crystallographica Section A Foundations of Crystallography(1996)10.1107/s0108767396095967

Top 67%

0.172DataRank

Top 67%1 citations

Philip E. Bourne, Ilya N. Shindyalov

Ilya N. Shindyalov

Indexed papers

Top data-sharing exemplar

Papers