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scCOSMIX: A Mixed‐Effects Framework for Differential Coexpression and Transcriptional Interactions Modeling in Single‐Cell RNA‐Seq

Statistics in Medicine(2025)10.1002/sim.70213Source: DataRank Database

scCOSMIX: A Mixed‐Effects Framework for Differential Coexpression and Transcriptional Interactions Modeling in Single‐Cell RNA‐Seq is a research paper published in Statistics in Medicine (2025). On theSindex it has a DataRank of 0.

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Enrichment:Funding (3 grants)Impact (FWCI 0.00)OA: hybridTopics (54)IDs (PubMed, OpenAlex)SDGs (1)

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Open Access

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Reusable (0/3)

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Authors (6)

Giampiero Marra ORCID,Daping Fan ORCID,Russell T. Shinohara ORCID,Danni Tu ORCID,Yen‐Yi Ho ORCID

Live enrichment

PubMed:40772737 OpenAlex:https://openalex.org/W4413048290

National Institutes of Health

Grant: 1R21CA264353

National Institutes of Health

Grant: 5R21CA264353-02

scDECO: A novel statistical framework to identify differential co-expression gene combinations systematically using single-cell RNA sequencing data

NCI NIH HHS

Grant: R21 CA264353

FWCI

0.00

Citation Percentile

0.1%

hybridLicense: cc-by

journalhttps://doi.org/10.1002/sim.70213

publisherhttps://doi.org/10.1002/sim.70213

publisherhttps://onlinelibrary.wiley.com/doi/pdf/10.1002/sim.70213

repositoryhttps://pubmed.ncbi.nlm.nih.gov/40772737

repositoryhttps://discovery.ucl.ac.uk/id/eprint/10214565/

Fields of Study

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis0206 medical engineering02 engineering and technologySingle-Cell AnalysisComputer SimulationHumansRNA-SeqSequence Analysis, RNAModels, StatisticalGene Expression ProfilingModels, GeneticTranscription, GeneticSingle-Cell Gene Expression Analysis

MeSH Terms

RNA-SeqSingle-Cell Gene Expression AnalysisComputer SimulationHumansModels, GeneticTranscription, GeneticModels, StatisticalSequence Analysis, RNAGene Expression ProfilingSingle-Cell Analysis

Keywords

Computer scienceCovariateCopula (linguistics)RNA-SeqGene regulatory networkComputational biologyData miningGeneGene expressionMachine learningBiologyEconometricsMathematicsGeneticsTranscriptomeModels, StatisticalModels, GeneticTranscription, GeneticSequence Analysis, RNAGene Expression ProfilingHumansComputer SimulationSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisResearch ArticleDifferential co‐expressionhierarchical study designmixed effectssingle‐cell RNA‐seqzero‐inflated copula model

Sustainable Development Goals

SDG 0: Decent work and economic growth