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Low-coverage whole-genome sequencing facilitates accurate and cost-effective haplotype reconstruction in complex mouse crosses

Mammalian Genome(2025)10.1007/s00335-025-10148-6Source: DataRank Database

Low-coverage whole-genome sequencing facilitates accurate and cost-effective haplotype reconstruction in complex mouse crosses is a research paper published in Mammalian Genome (2025). On theSindex it has a DataRank of 0.183. It has been cited 2 times, with 2 citing works in its 1-hop citation network.

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0.183DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access2 citations · 2 citing works in its network

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Data availability

Repositories this paper deposited data in (declared in PubMed).

SRAPRJNA1259049 PRJNA1259492 PRJNA1275001 PRJNA1261999

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (4 grants)Impact (FWCI 1.84)OA: hybridTopics (49)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 90%Citation Network 10%

Base Score Contribution

0.165

From this paper's citation signal

Citation Network Contribution

0.0183

From 2 citing papers with measurable signal

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Top 2 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 2 citers.

Low-Coverage Whole-Genome Sequencing (lcWGS) in Cattle: Analysis of Potential and Prospects for Application
Animals20251 citations42 referencesContributes 0.017
Fifteen years of the Diversity Outbred mouse model: a review
Mammalian Genome20261 citations137 referencesContributes 0.005

Authors (10)

Lydia K. Wooldridge ORCID,Emily Swanzey ORCID,Mary Barter ORCID,Chrystal Snow ORCID,Michael C. Saul ORCID

Live enrichment

PubMed:40593333 PMC:PMC12365916 OpenAlex:https://openalex.org/W4411863428

JAX Scientific Services Innovation Fund

Grant: 19005-24-01

National Institutes of Health

Grant: R24OD030037

NCI NIH HHS

Grant: P30 CA034196

National Institutes of Health

Grant: 5R24OD030037-02

Genetically Diverse Mouse Embryonic Stem Cells: A Platform for Cellular Systems Genetics

FWCI

1.84

Citation Percentile

0.9%

Citation Trend

2025

2026

hybridLicense: cc-by

journalhttps://link.springer.com/content/pdf/10.1007/s00335-025-10148-6.pdf

publisherhttps://link.springer.com/content/pdf/10.1007/s00335-025-10148-6.pdf

publisherhttps://link.springer.com/article/10.1007/s00335-025-10148-6/fulltext.html

journalhttps://doi.org/10.1007/s00335-025-10148-6

repositoryhttps://pubmed.ncbi.nlm.nih.gov/40593333

Fields of Study

Genetic Mapping and Diversity in Plants and AnimalsGenetic and phenotypic traits in livestockGenetic diversity and population structure0206 medical engineering02 engineering and technologyAnimalsHaplotypesMiceWhole Genome SequencingPolymorphism, Single NucleotideCrosses, GeneticQuantitative Trait LociGenomeGenotypeCost-Benefit Analysis

MeSH Terms

Whole Genome SequencingAnimalsCost-Benefit AnalysisCrosses, GeneticGenotypeHaplotypesGenomePolymorphism, Single NucleotideQuantitative Trait LociMice

Keywords

BiologyHaplotypeGenotypingGeneticsGenomeSingle-nucleotide polymorphismDeep sequencingComputational biologyDNA sequencingGenotypeGeneMouseQTL mappingDiversity OutbredLow-Coverage WgsMiceHaplotypesWhole Genome SequencingCost-Benefit AnalysisQuantitative Trait LociAnimalsPolymorphism, Single NucleotideArticleCrosses, Genetic