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A deformation energy model reveals sequence-dependent property of nucleosome positioning

Chromosoma(2021)10.1007/s00412-020-00750-9Source: DataRank Database

A deformation energy model reveals sequence-dependent property of nucleosome positioning is a research paper published in Chromosoma (2021). On theSindex it has a DataRank of 0.480. It has been cited 8 times, with 8 citing works in its 1-hop citation network.

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0.480DataRank · unranked

Scored on demand from live citation data

8 citations · 8 citing works in its network

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DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (4 grants)Impact (FWCI 0.52)OA: hybridTopics (39)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (0/2)

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 69%Citation Network 31%

Base Score Contribution

0.330

From this paper's citation signal

Citation Network Contribution

0.151

From 7 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 8 citers.

Pseudomonas -Tailed Lytic Phages: Genome Mechanical Analysis And Putative Correlation With Virion Morphogenesis Yield
Future Microbiology20229 citations48 referencesContributes 0.048
DNA Sequence-Dependent Properties of Nucleosome Positioning in Regions of Distinct Chromatin States in Mouse Embryonic Stem Cells
International Journal of Molecular Sciences20222 citations38 referencesContributes 0.029
The Active Mechanism of Nucleosome Depletion by Poly(dA:dT) Tracts In Vivo
International Journal of Molecular Sciences202122 citations123 referencesContributes 0.025
Chromatin accessibility shapes meiotic recombination in mouse primordial germ cells through assisting double-strand breaks and loop formation
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms20224 citations67 referencesContributes 0.024
Epigenetic Marks and Variation of Sequence-Based Information Along Genomic Regions Are Predictive of Recombination Hot/Cold Spots in Saccharomyces cerevisiae
Frontiers in Genetics20212 citations57 referencesContributes 0.019

Authors (5)

Hongyu Zhao,Hu Meng,Yongqiang Xing,Lu Cai,Guoqing Liu ORCID

Live enrichment

PubMed:33452566 PMC:PMC7889546 OpenAlex:https://openalex.org/W3124098632

National Natural Science Foundation of China

Grant: 31660322

Natural Science Foundation of Inner Mongolia

Grant: 2018LH03023

Natural Science Foundation of Inner Mongolia

Grant: 2019BS03024

National Natural Science Foundation of China

Grant: 31760247

FWCI

0.52

Citation Percentile

0.6%

Citation Trend

2021

2022

2023

2026

hybridLicense: cc-by

journalhttps://link.springer.com/content/pdf/10.1007/s00412-020-00750-9.pdf

publisherhttps://link.springer.com/content/pdf/10.1007/s00412-020-00750-9.pdf

journalhttps://doi.org/10.1007/s00412-020-00750-9

repositoryhttps://pubmed.ncbi.nlm.nih.gov/33452566

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/7889546

Fields of Study

Genomics and Chromatin DynamicsRNA and protein synthesis mechanismsDNA Repair MechanismsAdenosine TriphosphatasesChromatin Assembly and DisassemblyDNA-Binding ProteinsEnergy MetabolismNucleosomesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsTranscription, Genetic

MeSH Terms

Adenosine TriphosphatasesDNA-Binding ProteinsEnergy MetabolismNucleosomesSaccharomyces cerevisiaeTranscription FactorsTranscription, GeneticSaccharomyces cerevisiae ProteinsChromatin Assembly and Disassembly

Keywords

NucleosomeHistoneSWI/SNFBiologyChromatinLinker DNAChromatosomeDeformation (meteorology)DNAPosition (finance)BiophysicsGeneticsPhysicsNucleosome OccupancyRotational PositioningChromatin RemodelerDeformation EnergyNucleosome Free Energy

Sustainable Development Goals

SDG 0: Affordable and clean energy