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In vivo detection of DNA secondary structures using permanganate/S1 footprinting with direct adapter ligation and sequencing (PDAL-Seq)

Methods in enzymology on CD-ROM/Methods in enzymology(2024)10.1016/bs.mie.2023.12.003Source: DataRank Database

In vivo detection of DNA secondary structures using permanganate/S1 footprinting with direct adapter ligation and sequencing (PDAL-Seq) is a research paper published in Methods in enzymology on CD-ROM/Methods in enzymology (2024). On theSindex it has a DataRank of 0. It has been cited 13 times.

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13 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (2 grants)Impact (FWCI 16.01)OA: closedTopics (34)IDs (PubMed, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

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Accessible (0/2)

Interoperable (0/2)

Reusable (0/3)

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Authors (7)

Sarah J. C. Craig ORCID,Kaivan Kamali,Bernadette Weissensteiner,Barbara C. McGrath,Angela Risch ORCID

Live enrichment

PubMed:38521584 OpenAlex:https://openalex.org/W4391127804

Cancer Cluster Salzburg

Grant: 20102-P1601064-FPR01-2017

National Institutes of Health

Grant: R35GM151945

FWCI

16.01

Citation Percentile

1.0%

Citation Trend

2024

2025

2026

closed

book serieshttps://doi.org/10.1016/bs.mie.2023.12.003

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38521584

Fields of Study

Advanced biosensing and bioanalysis techniquesDNA and Nucleic Acid ChemistryRNA and protein synthesis mechanismsDNAG-QuadruplexesOxidesManganese CompoundsOligonucleotides

MeSH Terms

DNAOligonucleotidesOxidesManganese CompoundsG-Quadruplexes

Keywords

FootprintingDNAAdapter (computing)Computational biologyBiologyDNA footprintingNucleaseDNA sequencingChemistryGeneticsGeneDNA-binding proteinTranscription factorComputer scienceBase sequenceG-quadruplexGalaxyDna Secondary StructuresNon-b Dna StructuresPermanganate/s1 Nuclease FootprintingSsdna Footprinting

Sustainable Development Goals

SDG 0: Life in Land