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BayesTME: An end-to-end method for multiscale spatial transcriptional profiling of the tissue microenvironment

Cell Systems(2023)10.1016/j.cels.2023.06.003Source: DataRank Database

BayesTME: An end-to-end method for multiscale spatial transcriptional profiling of the tissue microenvironment is a research paper published in Cell Systems (2023). On theSindex it has a DataRank of 0. It has been cited 23 times.

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Open Access23 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (13 grants)Impact (FWCI 2.04)OA: hybridTopics (36)IDs (PubMed, PMC, OpenAlex)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (7)

Miranda V. Hunter ORCID,Jacqueline Chou ORCID,Jeffrey F. Quinn,Mingyuan Zhou ORCID,Richard M. White ORCID

Live enrichment

PubMed:37473731 PMC:PMC10368078 OpenAlex:https://openalex.org/W4384830693

National Science Foundation

Grant: 2212418

Collaborative Research: III: Medium: Conditional Transport: Theory, Methods, Computation, and Applications

NCI NIH HHS

Grant: R01 CA229215

National Cancer Institute

Grant: R01 CA238317

National Cancer Institute

Grant: R37 CA271186

NCI NIH HHS

Grant: U54 CA274492

NCI NIH HHS

Grant: DP2 CA186572

NCI NIH HHS

Grant: P30 CA008748

Pershing Square Foundation

American Cancer Society

Mark Foundation For Cancer Research

National Institutes of Health

Break Through Cancer

Melanoma Research Alliance

FWCI

2.04

Citation Percentile

0.9%

Citation Trend

2022

2023

2024

2025

2026

hybridLicense: cc-by-nc-nd

journalhttp://www.cell.com/article/S2405471223001564/pdf

publisherhttp://www.cell.com/article/S2405471223001564/pdf

journalhttps://doi.org/10.1016/j.cels.2023.06.003

repositoryhttps://pubmed.ncbi.nlm.nih.gov/37473731

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/10368078

Fields of Study

Single-cell and spatial transcriptomicsImmune cells in cancerCell Image Analysis Techniques0206 medical engineering02 engineering and technology

MeSH Terms

AnimalsBayes TheoremHumansMacrophagesZebrafishBenchmarkingGene Expression Profiling

Keywords

Computational biologyDeconvolutionBiologyPhenotypeTranscriptomeReprogrammingComputer scienceGeneticsGeneGene expressionAlgorithmSpatial modelingTumor MicroenvironmentMachine LearningBayesian MethodsSpatial Gene ExpressionSpatial TranscriptomicsBenchmarkingGene Expression ProfilingMacrophagesHumansAnimalsBayes TheoremZebrafish

BayesTME: An end-to-end method for multiscale spatial transcriptional profiling of the tissue microenvironment

FAIR Checklist

Authors (7)

Funding (13 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)