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Probing enzyme-dependent pseudouridylation using direct RNA sequencing to assess epitranscriptome plasticity in a neuronal cell line

Cell Systems(2025)10.1016/j.cels.2025.101238Source: DataRank Database

Probing enzyme-dependent pseudouridylation using direct RNA sequencing to assess epitranscriptome plasticity in a neuronal cell line is a research paper published in Cell Systems (2025). On theSindex it has a DataRank of 0. It has been cited 10 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access10 citations

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bioproject hpa uniprot

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (5 grants)Impact (FWCI 3.66)OA: greenTopics (39)IDs (PubMed, PMC, OpenAlex)Annotations (3)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (14)

Sepideh Tavakoli ORCID,Yuchen Qiu ORCID,Amr Makhamreh ORCID,Keqing Nian,Stuart Akeson ORCID

Live enrichment

PubMed:40118059 PMC:PMC12006983 OpenAlex:https://openalex.org/W4408660030

NIH National Institute of General Medical Sciences

Grant: R35-GM134931

National Human Genome Research Institute

Grant: R01HG011087

National Human Genome Research Institute

Grant: R01HG012856

NIGMS NIH HHS

Grant: R35 GM134931

National Institutes of Health

FWCI

3.66

Citation Percentile

0.9%

Citation Trend

2024

2025

2026

greenLicense: http://www.elsevier.com/open-access/userlicense/1.0/

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC12006983/

publisherhttps://api.elsevier.com/content/article/PII:S2405471225000717?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2405471225000717?httpAccept=text/plain

journalhttps://doi.org/10.1016/j.cels.2025.101238

Fields of Study

RNA modifications and cancerPeptidase Inhibition and AnalysisRNA Research and SplicingHumansNeuronsSequence Analysis, RNAPseudouridineTranscriptomeCell DifferentiationRNA, MessengerCell Line, TumorEpigenesis, GeneticTretinoinCell Line

MeSH Terms

Cell DifferentiationCell LineHumansNeuronsPseudouridineRNA, MessengerTretinoinSequence Analysis, RNAEpigenesis, GeneticCell Line, TumorTranscriptome

Keywords

RNABiologyComputational biologyEnzymeBiochemistryGeneDifferentiationPlasticityPseudouridineRna SequencingEpitranscriptomeMrna ModificationNanopore DrsPb(2+) Neurotoxicant

Sustainable Development Goals

SDG 0: Zero hunger

Probing enzyme-dependent pseudouridylation using direct RNA sequencing to assess epitranscriptome plasticity in a neuronal cell line

FAIR Checklist

Authors (14)

Funding (5 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)