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PolyAMiner-Bulk is a deep learning-based algorithm that decodes alternative polyadenylation dynamics from bulk RNA-seq data

Cell Reports Methods(2024)10.1016/j.crmeth.2024.100707Source: DataRank Database

PolyAMiner-Bulk is a deep learning-based algorithm that decodes alternative polyadenylation dynamics from bulk RNA-seq data is a research paper published in Cell Reports Methods (2024). On theSindex it has a DataRank of 0. It has been cited 10 times.

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Open Access10 citations

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Enrichment:Funding (5 grants)Impact (FWCI 1.56)OA: goldTopics (33)IDs (PubMed, PMC, OpenAlex)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Eric J. Wagner ORCID,Mirjana Maletić‐Savatić ORCID,Zhandong Liu ORCID,Hari Krishna Yalamanchili ORCID,Venkata S. Jonnakuti ORCID

Live enrichment

PubMed:38325383 PMC:PMC10921021 OpenAlex:https://openalex.org/W4391563323

NIMH NIH HHS

Grant: R01 MH130356

NICHD NIH HHS

Grant: P50 HD103555

Eunice Kennedy Shriver National Institute of Child Health and Human Development

National Institute of General Medical Sciences

National Library of Medicine

FWCI

1.56

Citation Percentile

0.8%

Citation Trend

2024

2025

2026

goldLicense: cc-by-nc-nd

journalhttps://doi.org/10.1016/j.crmeth.2024.100707

publisherhttps://doi.org/10.1016/j.crmeth.2024.100707

publisherhttps://api.elsevier.com/content/article/PII:S2667237524000213?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2667237524000213?httpAccept=text/plain

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38325383

Fields of Study

RNA modifications and cancerRNA Research and SplicingCancer-related molecular mechanisms researchHumansPolyadenylationRNA-SeqRNADeep LearningSequence Analysis, RNAAlgorithms

MeSH Terms

Deep LearningRNA-SeqAlgorithmsHumansRNASequence Analysis, RNAPolyadenylation

Keywords

PolyadenylationRNAComputer scienceAlgorithmArtificial intelligenceComputational biologyBiologyGeneticsGenePost-transcriptional regulationGene regulationBioinformaticsDeep LearningAlternative Polyadenylation (Apa)Large Language Model (Llm)Cp: Systems Biology

PolyAMiner-Bulk is a deep learning-based algorithm that decodes alternative polyadenylation dynamics from bulk RNA-seq data

FAIR Checklist

Authors (5)

Funding (5 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)