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Augusta: From RNA‐Seq to gene regulatory networks and Boolean models

Computational and Structural Biotechnology Journal(2024)10.1016/j.csbj.2024.01.013Source: DataRank Database

Augusta: From RNA‐Seq to gene regulatory networks and Boolean models is a research paper published in Computational and Structural Biotechnology Journal (2024). On theSindex it has a DataRank of 0. It has been cited 7 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access7 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 1.13)OA: goldTopics (30)IDs (PubMed, PMC, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (6)

Zdenek Vafek ORCID,Bhanwar Lal Puniya ORCID,Ralf Zimmer ORCID,Tomáš Helikar ORCID,Karel Sedlář ORCID

Live enrichment

PubMed:38312198 PMC:PMC10837063 OpenAlex:https://openalex.org/W4391060036

H2020 Marie Skłodowska-Curie Actions

Grant: 101023766

National Institutes of Health

Grant: 35GM119770

NIGMS NIH HHS

Grant: R35 GM119770

Horizon 2020 Framework Programme

GAČR

Horizon 2020

FWCI

1.13

Citation Percentile

0.8%

Citation Trend

2024

2025

2026

goldLicense: cc-by-nc-nd

journalhttp://www.csbj.org/article/S2001037024000138/pdf

publisherhttp://www.csbj.org/article/S2001037024000138/pdf

publisherhttps://api.elsevier.com/content/article/PII:S2001037024000138?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2001037024000138?httpAccept=text/plain

publisherhttps://spj.science.org/doi/pdf/10.1016/j.csbj.2024.01.013

Fields of Study

Gene Regulatory Network AnalysisBioinformatics and Genomic NetworksMicrobial Metabolic Engineering and Bioproduction

Keywords

Computer scienceInferenceComputational biologyGene regulatory networkPython (programming language)GenomeSBMLGeneDocumentationSystems biologyData miningRegulatory sequenceBoolean modelRegulation of gene expressionBiologyGeneticsArtificial intelligenceGene expressionProgramming languageXMLWorld Wide WebMathematicsDatabasesMutual informationGene InteractionsTranscription Factor Binding MotifsPython Package

Augusta: From RNA‐Seq to gene regulatory networks and Boolean models

FAIR Checklist

Authors (6)

Funding (6 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)