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WebSTR: A Population-wide Database of Short Tandem Repeat Variation in Humans

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.168260Source: DataRank Database

WebSTR: A Population-wide Database of Short Tandem Repeat Variation in Humans is a dataset published in Journal of Molecular Biology (2023). On theSindex it has a DataRank of 1.0, placing it in the top 19.6% of the data-sharing corpus. It has been cited 29 times, with 25 citing works in its 1-hop citation network.

Top 20%percentile

1.0DataRank

Ranks in the top 20% for downstream scientific impact

Data paper Open Access29 citations · 25 citing works in its network

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DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (12 grants)Impact (FWCI 2.58)OA: hybridTopics (55)IDs (PubMed, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (1/3)

Dataset classification

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DataRank Breakdown

Base Score 49%Citation Network 51%

Base Score Contribution

0.510

From this paper's citation signal

Citation Network Contribution

0.522

From 18 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 25 citers.

Advancements and future perspectives of human tandem repeats
Science Bulletin20242 citations15 referencesContributes 0.073
The Influence of Trinucleotide Repeats in the Androgen Receptor Gene on Androgen-related Traits and Diseases
The Journal of Clinical Endocrinology & Metabolism20248 citations33 referencesContributes 0.067
Analysis of Tandem Repeats in Short‐Read Sequencing Data: From Genotyping Known Pathogenic Repeats to Discovering Novel Expansions
Current Protocols20245 citations28 referencesContributes 0.064
HMOX1 genetic polymorphisms and outcomes in infectious disease: A systematic review
PLoS ONE202216 citations45 referencesContributes 0.063
Insights into DNA repeat expansions among 900,000 biobank participants
Nature202610 citations63 referencesContributes 0.038

Authors (7)

Max A. Verbiest ORCID,Feifei Xia ORCID,Helyaneh Ziaei Jam ORCID,Inti Zlobec ORCID,Maria Anisimova ORCID

Live enrichment

PubMed:37678708 OpenAlex:https://openalex.org/W4386496100

National Human Genome Research Institute

Grant: R01HG010149

National Human Genome Research Institute

Grant: R01HG010885

National Human Genome Research Institute

Grant: RM1HG011558

Horizon Europe

Grant: 823886

Repeat protein Function Refinement, Annotation and Classification of Topologies

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Grant: CRSII5_193832

NIH HHS

Grant: DP5 OD024577

National Institutes of Health

Grant: 3RM1HG011558-02S1

Genetic & Social Determinants of Health: Center for Admixture Science and Technology

National Institutes of Health

Grant: 5R01HG010885-04

Systematic characterization of tandem repeat variants contributing to complex traits

Swiss National Science Foundation

Grant: 193832

Trans-omic approach to colorectal cancer: an integrative computational and clinical perspective

National Institutes of Health

Grant: 2R01HG010149-05

Refining Mendelian disease analysis via detection of clinically relevant repeat variants

National Institutes of Health

H2020 Marie Skłodowska-Curie Actions

FWCI

2.58

Citation Percentile

0.9%

Influential Citations

Citation Trend

2012

2022

2023

2024

2025

2026

hybridLicense: cc-by

journalhttps://ars.els-cdn.com/content/image/1-s2.0-S0022283623003716-ga1_lrg.jpg

HYBRIDhttps://ars.els-cdn.com/content/image/1-s2.0-S0022283623003716-ga1_lrg.jpg

publisherhttps://ars.els-cdn.com/content/image/1-s2.0-S0022283623003716-ga1_lrg.jpg

publisherhttps://api.elsevier.com/content/article/PII:S0022283623003716?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S0022283623003716?httpAccept=text/plain

Fields of Study

RNA modifications and cancerGenetic Neurodegenerative DiseasesGenomics and Phylogenetic StudiesMedicineBiologyComputer Science0301 basic medicine03 medical and health sciencesHumansComputational BiologyGenotypeMicrosatellite RepeatsGenome, HumanDatabases, GeneticGenome-Wide Association StudyGenetic VariationDatasets as TopicColorectal Neoplasms

MeSH Terms

GenotypeHumansGenetic VariationColorectal NeoplasmsGenome, HumanMicrosatellite RepeatsComputational BiologyDatabases, GeneticGenome-Wide Association StudyDatasets as Topic

Keywords

BiologyGenomeHuman genomePopulationHuman genetic variationMicrosatelliteGenetic variationGeneticsGenome projectGenome-wide association studyComputational biologyGenotypeSingle-nucleotide polymorphismGeneMedicineDatabaseshort tandem repeatsWeb PortalApiBioinformatics (Computational Biology)Genome, HumanDatasets as TopicDatabases, GeneticBioinformatik (beräkningsbiologi)HumansColorectal NeoplasmsMicrosatellite Repeats