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PhosNetVis: A web-based tool for fast kinase-substrate enrichment analysis and interactive 2D/3D network visualizations of phosphoproteomics data

Patterns(2025)10.1016/j.patter.2024.101148Source: DataRank Database

PhosNetVis: A web-based tool for fast kinase-substrate enrichment analysis and interactive 2D/3D network visualizations of phosphoproteomics data is a research paper published in Patterns (2025). On theSindex it has a DataRank of 0.

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Enrichment:Funding (11 grants)Impact (FWCI 0.00)OA: goldTopics (24)IDs (PubMed, PMC, OpenAlex)Annotations (1)

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Context only (not used in score)

Findable (1/2)

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Accessible (1/2)

Open Access

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Reusable (0/3)

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Authors (9)

Berk Turhan ORCID,Irene Font Peradejordi ORCID,Shreya Chandrasekar ORCID,Selim Kalaycı ORCID,Sacha Gnjatic ORCID

Live enrichment

PubMed:39896259 PMC:PMC11783894 OpenAlex:https://openalex.org/W4406270016

National Institutes of Health

Grant: K99 AI163868

National Institute of Diabetes and Digestive and Kidney Diseases

Grant: U01 DK124165

National Institutes of Health National Cancer Institute

Grant: U24 CA224319

National Institutes of Health National Cancer Institute

Grant: P01 CA196521

National Cancer Institute Cancer Moonshot

Grant: R33 CA263705-01

NCI NIH HHS

Grant: R33 CA263705

NCI NIH HHS

Grant: P30 CA196521

National Institutes of Health

Grant: 1K99AI163868-01A1

Decoding Viral Control of Host Kinase Signaling to Design Combination Therapy

National Institutes of Health

Grant: 1R33CA263705-01

PRIMAVO: Interactive exploration of cancer patient precision immune monitoring data in clinical trials

National Institutes of Health

Grant: 5U24CA224319-04

High-Dimensional Immune Monitoring of NCI-Supported Immunotherapy Trials

National Institutes of Health

Grant: 5U01DK124165-02

Characterizing and predicting colitis in immune checkpoint blockade-treated cancer patients

FWCI

0.00

Citation Percentile

0.0%

goldLicense: cc-by-nc

journalhttps://doi.org/10.1016/j.patter.2024.101148

publisherhttps://doi.org/10.1016/j.patter.2024.101148

publisherhttps://api.elsevier.com/content/article/PII:S2666389924003209?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2666389924003209?httpAccept=text/plain

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39896259

Fields of Study

Bioinformatics and Genomic NetworksGene expression and cancer classificationMetabolomics and Mass Spectrometry Studies0206 medical engineering02 engineering and technology

Keywords

PhosphoproteomicsComputer scienceSubstrate (aquarium)Computational biologyKinaseCell biologyBiologyProtein kinase APhosphorylation3d VisualizationNetwork VisualizationInteractive VisualizationCptacKinase-substrate InteractionFast Kinase-substrate Enrichment AnalysisResourceMolecular Networks (q-bio.MN)FOS: Biological sciencesQuantitative Biology - Molecular Networks

PhosNetVis: A web-based tool for fast kinase-substrate enrichment analysis and interactive 2D/3D network visualizations of phosphoproteomics data

FAIR Checklist

Authors (9)

Funding (11 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)