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Protocol for using TRIBE to study RNA-protein interactions and nuclear organization in mammalian cells

STAR Protocols(2021)10.1016/j.xpro.2021.100634Source: DataRank Database

Protocol for using TRIBE to study RNA-protein interactions and nuclear organization in mammalian cells is a research paper published in STAR Protocols (2021). On theSindex it has a DataRank of 0. It has been cited 4 times.

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0DataRank · unranked

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Open Access4 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (11 grants)Impact (FWCI 0.15)OA: goldTopics (53)IDs (PubMed, PMC, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (4)

Michael Rosbash ORCID,Robert H. Singer ORCID,Reazur Rahman ORCID,Jeetayu Biswas ORCID

Live enrichment

PubMed:34258595 PMC:PMC8255943 OpenAlex:https://openalex.org/W3174671817

National Institutes of Health

Grant: T32GM007288

National Institutes of Health

Grant: R01DA037721

National Institutes of Health

Grant: F30CA214009

National Institutes of Health

Grant: P30CA013330

National Institutes of Health

Grant: R01NS083085

National Institutes of Health

Grant: 3P30CA013330-39S3

Core Support for Cancer Center

National Institutes of Health

Grant: 5R01DA037721-02

A new tool for the cell-specific identification of RNA binding protein targets

National Institutes of Health

Grant: 5F30CA214009-02

The sequence recognition, structure and function of the IMP family of mRNA binding proteins

National Institutes of Health

Grant: 2T32GM007288-24

MEDICAL SCIENTIST TRAINING PROGRAM

National Institutes of Health

Grant: 5R01NS083085-29

Mechanism of mRNA Localization and Localized Translation in Neurons

Howard Hughes Medical Institute

FWCI

0.15

Citation Percentile

0.4%

Citation Trend

2021

2024

2025

2026

goldLicense: cc-by-nc-nd

journalhttps://doi.org/10.1016/j.xpro.2021.100634

publisherhttps://doi.org/10.1016/j.xpro.2021.100634

publisherhttps://api.elsevier.com/content/article/PII:S2666166721003415?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2666166721003415?httpAccept=text/plain

repositoryhttps://pubmed.ncbi.nlm.nih.gov/34258595

Fields of Study

RNA regulation and diseaseRNA Research and SplicingRNA and protein synthesis mechanisms0301 basic medicine0206 medical engineering02 engineering and technology03 medical and health sciencesAnimalsCell LineCell NucleusComputational BiologyHumansPlasmidsProtein BindingRNARNA-Binding ProteinsReproducibility of Results

MeSH Terms

AnimalsCell LineCell NucleusHumansPlasmidsProtein BindingRNAReproducibility of ResultsRNA-Binding ProteinsComputational Biology

Keywords

RNATribeRNA-binding proteinBiologyComputational biologyRNA editingGeneticsGeneMolecular biologySequencingBioinformaticsGenomicsGene ExpressionRnaseqFlow Cytometry/mass CytometryCell NucleusScience (General)RNA-Binding ProteinsReproducibility of ResultsCell LineQ1-390ProtocolAnimalsHumansPlasmidsProtein Binding

Protocol for using TRIBE to study RNA-protein interactions and nuclear organization in mammalian cells

FAIR Checklist

Authors (4)

Funding (11 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)