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Protocol for detecting RBM33-binding sites in HEK293T cells using PAR-CLIP-seq

STAR Protocols(2024)10.1016/j.xpro.2024.102855Source: DataRank Database

Protocol for detecting RBM33-binding sites in HEK293T cells using PAR-CLIP-seq is a research paper published in STAR Protocols (2024). On theSindex it has a DataRank of 0.

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geo refseq uniprot

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (17 grants)Impact (FWCI 0.00)OA: goldTopics (39)IDs (PubMed, PMC, OpenAlex)Annotations (3)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Shun Liu ORCID,Allen Zhu ORCID,Chuan He ORCID,Zhijian Qian ORCID,Fang Yu ORCID

Live enrichment

PubMed:38300798 PMC:PMC10846379 OpenAlex:https://openalex.org/W4391397102

National Institutes of Health

Grant: R01 HL157539-01

National Institutes of Health

Grant: RM1 HG008935

National Institutes of Health

Grant: CA259576-01

National Institutes of Health

Grant: DK129489

National Institutes of Health

Grant: R01CA266659

NCI NIH HHS

Grant: R01 CA259576

NIDDK NIH HHS

Grant: R56 DK129489

NIDDK NIH HHS

Grant: R01 DK129489

NHLBI NIH HHS

Grant: R01 HL157539

National Institutes of Health

Grant: 5R01DK129489-03

The role of ALKBH5-mediated RNA demethylation in the maintenance of genomic stability in HSPCs

National Institutes of Health

Grant: 1R01CA266659-01

The Novel Role and Mechanism of RBM33 in Leukemogenesis

National Institutes of Health

Grant: 5R01HL157539-04

Role of the TET1 short isoform in MDS development and maintenance

National Institutes of Health

Grant: 3RM1HG008935-05S1

Center for dynamic RNA epitranscriptomes - Covid 19 Supplement Version 2

National Institutes of Health

Grant: 7R01CA259576-05

The role of YTHDC1 in normal and malignant hematopoiesis

Leukemia and Lymphoma Society

Howard Hughes Medical Institute

FWCI

0.00

Citation Percentile

0.0%

goldLicense: cc-by-nc-nd

journalhttps://doi.org/10.1016/j.xpro.2024.102855

publisherhttps://doi.org/10.1016/j.xpro.2024.102855

publisherhttps://api.elsevier.com/content/article/PII:S2666166724000200?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2666166724000200?httpAccept=text/plain

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38300798

Fields of Study

RNA Research and SplicingRNA modifications and cancerRNA and protein synthesis mechanisms0301 basic medicine0206 medical engineering02 engineering and technology03 medical and health sciencesHumansHEK293 CellsChromatin Immunoprecipitation SequencingBinding SitesRNA-Binding ProteinsTranscriptome

MeSH Terms

Chromatin Immunoprecipitation SequencingBinding SitesHumansRNA-Binding ProteinsHEK293 CellsTranscriptome

Keywords

ImmunoprecipitationComputational biologyRNA-SeqBiologyHEK 293 cellsTranscriptomeGeneGene expressionGeneticsMolecular biologyCell biologyBioinformaticsScience (General)Binding SitesRNA-Binding ProteinsQ1-390HEK293 CellsProtocolHumansChromatin Immunoprecipitation Sequencing

Sustainable Development Goals

SDG 3: 3. Good health

Protocol for detecting RBM33-binding sites in HEK293T cells using PAR-CLIP-seq

FAIR Checklist

Authors (5)

Funding (17 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)