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Protocol to evaluate mouse brain spatial cell type-resolved transcriptomic discoveries using 10× Visium spatial transcriptomics and FLEX scRNA-seq

STAR Protocols(2025)10.1016/j.xpro.2025.104277Source: DataRank Database

Protocol to evaluate mouse brain spatial cell type-resolved transcriptomic discoveries using 10× Visium spatial transcriptomics and FLEX scRNA-seq is a research paper published in STAR Protocols (2025). On theSindex it has a DataRank of 0. It has been cited 2 times.

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Enrichment:Funding (5 grants)OA: goldTopics (25)IDs (PubMed, PMC)Annotations (1)

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Authors (5)

Ricardo Miramontes ORCID,John C. Reidling,Ryan G. Lim ORCID,Leslie M. Thompson ORCID,Mara S. Burns

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PubMed:41456279 PMC:PMC12803812

California Institute for Regenerative Medicine

Grant: EDUC4-12822

National Institute of Neurological Disorders and Stroke

Grant: F31NS134306-01A1

National Institute of Neurological Disorders and Stroke

Grant: R35NS116872

National Institute of Neurological Disorders and Stroke

Grant: R01NS089076

National Institutes of Health

goldLicense: cc-by

publisherhttps://doi.org/10.1016/j.xpro.2025.104277

publisherhttps://api.elsevier.com/content/article/PII:S2666166725006835?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2666166725006835?httpAccept=text/plain

repositoryhttps://doaj.org/article/1dcc96488e5249b98ac50c7a970bc340

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC12803812/

Fields of Study

AnimalsMiceBrainSingle-Cell AnalysisTranscriptomeGene Expression ProfilingRNA-SeqSequence Analysis, RNASingle-Cell Gene Expression Analysis

MeSH Terms

BrainAnimalsMiceGene Expression ProfilingSequence Analysis, RNASingle-Cell AnalysisTranscriptomeRNA-SeqSingle-Cell Gene Expression Analysis

Keywords

Molecular biologyCell biologySequencingSingle cellNeuroscienceGene ExpressionRna-seq

Protocol to evaluate mouse brain spatial cell type-resolved transcriptomic discoveries using 10× Visium spatial transcriptomics and FLEX scRNA-seq

FAIR Checklist

Authors (5)

Funding (5 grants)

Open Access

Topics

Annotations (Europe PMC)