Pilot corpus: NIH-funded biomedical datasets. Any DOI can be scored on demand — network effects sharpen as coverage grows.

WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation Data

Journal of Chemical Information and Modeling(2024)10.1021/acs.jcim.4c00867Source: DataRank Database

WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation Data is a research paper published in Journal of Chemical Information and Modeling (2024). On theSindex it has a DataRank of 0. It has been cited 4 times.

N/A

0DataRank · unranked

Scored on demand from live citation data

Open Access4 citations

Download PDF

Cite:

Linked data & code

pdb doi

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (11 grants)OA: hybridTopics (29)IDs (PubMed, PMC, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

FAIR checklist signals are shown for context only and do not affect DataRank scoring.

Run a calibrated FAIR evaluation for this paper →

We only score data papers we can read in full — never from an abstract alone.

Authors (2)

Lillian T. Chong ORCID,Darian T. Yang ORCID

Live enrichment

PubMed:39013164 PMC:PMC11323263 OpenAlex:https://openalex.org/W4400674750

Division of Molecular and Cellular Biosciences

Grant: MCB-2112871

National Institutes of Health

Grant: R01 GM1151805

National Institutes of Health

Grant: T32 AI065380

NIGMS NIH HHS

Grant: R01 GM111805

NIGMS NIH HHS

Grant: R01 GM115185

NIGMS NIH HHS

Grant: R01 GM115805

National Science Foundation

Grant: 1151805

Body Movement and Action Perception

National Institutes of Health

Grant: 5T32AI065380-03

PITT AIDS RESEARCH TRAINING PROGRAM

National Science Foundation

Grant: 2112871

Collaborative Research: Tackling Functional Protein States at Atomic Detail by Integrating Weighted Ensemble Simulations with Magnetic Resonance Restraints

National Science Foundation

Grant: 2117681

MRI: Acquisition of Cutting-Edge GPU and MPI Nodes for the Interdisciplinary Pitt Center for Research Computing

University of Pittsburgh

hybridLicense: cc-by

journalhttps://pubs.acs.org/doi/pdf/10.1021/acs.jcim.4c00867

publisherhttps://pubs.acs.org/doi/pdf/10.1021/acs.jcim.4c00867

journalhttps://doi.org/10.1021/acs.jcim.4c00867

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39013164

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/11323263

Fields of Study

Protein Structure and DynamicsEnzyme Structure and FunctionMicrobial Metabolic Engineering and Bioproduction0301 basic medicine03 medical and health sciences0103 physical sciences01 natural sciencesMolecular Dynamics SimulationSoftwareUser-Computer InterfaceHIV-1Capsid Proteins

MeSH Terms

SoftwareUser-Computer InterfaceHIV-1Capsid ProteinsMolecular Dynamics Simulation

Keywords

Python (programming language)R packageComputer scienceComputer graphics (images)DatabaseProgramming languageOperating systemUser-Computer InterfaceHIV-1Capsid ProteinsMolecular Dynamics SimulationSoftware

WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation Data

FAIR Checklist

Authors (2)

Funding (11 grants)

Open Access

Topics

Annotations (Europe PMC)