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TopDIA: A Software Tool for Top-Down Data-Independent Acquisition Proteomics

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00293Source: DataRank Database

TopDIA: A Software Tool for Top-Down Data-Independent Acquisition Proteomics is a research paper published in Journal of Proteome Research (2024). On theSindex it has a DataRank of 0. It has been cited 6 times.

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Open Access6 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (4 grants)Impact (FWCI 1.00)OA: hybridTopics (37)IDs (PubMed, PMC, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (6)

Xingzhao Xiong ORCID,Tian Xu ORCID,Yong Zang ORCID,Liangliang Sun ORCID,Xiaowen Liu ORCID

Live enrichment

PubMed:39641251 PMC:PMC11705214 OpenAlex:https://openalex.org/W4405114987

National Institutes of Health

Grant: R01CA247863

National Institutes of Health

Grant: R01GM118470

National Institutes of Health

Grant: 5R01GM118470-07

COMPUTATIONAL TOOLS FOR PROTEOFORM IDENTIFICATION BY TOP-DOWNDATA INDEPENDENT ACQUISITION MASS SPECTROMETRY

National Institutes of Health

Grant: 5R01CA247863-03

Quantitative top-down proteomics of human colorectal cancer cells and tumors

FWCI

1.00

Citation Percentile

0.7%

Citation Trend

2025

2026

hybridLicense: cc-by

journalhttps://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.4c00293?ref=article_openPDF

publisherhttps://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.4c00293?ref=article_openPDF

publisherhttps://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.4c00293

journalhttps://doi.org/10.1021/acs.jproteome.4c00293

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39641251

Fields of Study

Advanced Proteomics Techniques and Applicationsvaccines and immunoinformatics approachesAdvanced Biosensing Techniques and Applications0206 medical engineering02 engineering and technology

MeSH Terms

Escherichia coliSoftwareEscherichia coli ProteinsDatabases, ProteinProteomicsEscherichia coli K12Tandem Mass Spectrometry

Keywords

ProteomicsComputer scienceSoftwareComputational biologyData miningChemistryBiologyOperating systemBiochemistryMass spectrometryTop-down ProteomicsData Independent AcquisitionProteoform IdentificationEscherichia coli K12Escherichia coli ProteinsTop-down data-dependent acquisition mass spectrometry (TD-DDA-MS)540Top-down data-independent acquisition mass spectrometry (TD-DIA-MS)Article576ProteoformsTandem Mass SpectrometryEscherichia coliTop-down mass spectrometryDatabases, Protein

TopDIA: A Software Tool for Top-Down Data-Independent Acquisition Proteomics

FAIR Checklist

Authors (6)

Funding (4 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)