A spatially-resolved transcriptional atlas of the murine dorsal pons at single-cell resolution is a dataset published in Nature Communications (2024). On theSindex it has a DataRank of 1.0, placing it in the top 20.1% of the data-sharing corpus. It has been cited 49 times, with 40 citing works in its 1-hop citation network. Its calibrated FAIR score is 67/100.
Ranks in the top 20% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The mouse DroNc-seq raw and processed data generated in this study have been deposited in the GEO database under accession code GSE226809.”
The paper provides a persistent identifier (GEO accession GSE226809) for its own data.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The mouse DroNc-seq raw and processed data generated in this study have been deposited in the GEO database under accession code GSE226809.”
GEO is a named data repository.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The mouse DroNc-seq raw and processed data generated in this study have been deposited in the GEO database under accession code GSE226809.”
The dataset identifier appears only in the body text (Data availability section), not as a reference-list entry.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The mouse DroNc-seq raw and processed data generated in this study have been deposited in the GEO database under accession code GSE226809.”
The statement points to a repository record (GEO) with an accession, matching Colavizza category 3. [majority verdict 'yes' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“A post-filtered dataset of 685,289 cells x 315 genes was inputted into Seurat v3.2.3 + Harmony v1.1 pipeline”
The dataset's extent is described in running prose (size in cells and genes) without an itemised inventory section or table.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The mouse DroNc-seq raw and processed data generated in this study have been deposited in the GEO database under accession code GSE226809.”
The text gives a route to the data (GEO) with no stated precondition; the data are publicly available.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The mouse DroNc-seq raw and processed data generated in this study have been deposited in the GEO database under accession code GSE226809.”
The paper describes the deposit action but does not apply an explicit access-level label (e.g., 'open access') to the data. [majority verdict 'partial' (3/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are from mouse, not human subjects, so no sensitive-data gatekeeper is named or required.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper neither states a retention period nor an availability timing; it only says data are deposited.
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format is named for the released data. [majority verdict 'no' (3/5 passes agreed)]
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data/metadata community standard (e.g., MIAME, MINSEQE) is named; only tools and analysis pipelines are referenced. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“10.5281/zenodo.3758540”
The paper provides a DOI for the MERlin pipeline, an external resource. [majority verdict 'yes' (3/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
The paper only licenses the article (CC BY 4.0), not the data; no reuse license is stated for the dataset.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is given for the released data; the accession is not versioned.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“10.5281/zenodo.10396868”
The study's own code is deposited on Zenodo with a DOI. [majority verdict 'yes' (4/5 passes agreed)]
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“R01DK075632”
The paper provides a specific grant number (R01DK075632) attached to a named funder.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“STAR (version 2.7.3)”
The paper names specific tools and versions used to produce the data (e.g., STAR 2.7.3).
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“Supplementary Data 8 (“excitatory neurons”) and 9 (“inhibitory neurons”) comprehensively list the neuronal MERFISH clusters, their marker genes, and spatial location.”— not found in the paper; verdict downgraded
Variable- and file-level definitions are provided inside the article (supplementary tables), not as a separate documentation object shipped with the data. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.587
From this paper's citation signal
Citation Network Contribution
0.424
From 25 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 40 citers.
NIMH NIH HHS
Grant: F32 MH012343
NIDDK NIH HHS
Grant: R01 DK125708
NINDS NIH HHS
Grant: R01 NS091126
NHLBI NIH HHS
Grant: R00 HL144923
NINDS NIH HHS
Grant: R01 NS072337
NIDDK NIH HHS
Grant: P20 DK119789
NIDDK NIH HHS
Grant: R01 DK113030
NHLBI NIH HHS
Grant: P01 HL149630
NIDDK NIH HHS
Grant: R01 DK075632
NCCIH NIH HHS
Grant: DP1 AT010971
FWCI
8.57
Citation Percentile
1.0%
Citation Trend
Fields of Study
MeSH Terms
Keywords
Sustainable Development Goals