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Profiling the genetic determinants of chromatin accessibility with scalable single-cell CRISPR screens

Nature Biotechnology(2021)10.1038/s41587-021-00902-xSource: DataRank Database

Profiling the genetic determinants of chromatin accessibility with scalable single-cell CRISPR screens is a research paper published in Nature Biotechnology (2021). On theSindex it has a DataRank of 0.716. It has been cited 117 times.

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0.716DataRank · unranked

Scored on demand from live citation data

Open Access117 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (8 grants)Impact (FWCI 6.15)OA: greenTopics (63)Linked Datasets (16)DataCite Reuse (16)IDs (PubMed, OpenAlex)

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Findable (2/2)

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Accessible (1/2)

Open Access

Interoperable (2/2)

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Reusable (0/3)

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DataRank Breakdown

Base Score 100%Citation Network 0%

Base Score Contribution

0.716

From this paper's citation signal

Citation Network Contribution

Citation network not refreshed for this result

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Authors (13)

Antonino Montalbano ORCID,Jiale Deng,Alejandro Méndez‐Mancilla ORCID,Hans‐Hermann Wessels ORCID,Nicholas Moss ORCID

Live enrichment

PubMed:33927415 OpenAlex:https://openalex.org/W3158694246

Human Frontier Science Program

Grant: LT000672/2019-L

European Molecular Biology Organization

Grant: ALTF 826-2018

U.S. Department of Health & Human Services | National Institutes of Health

Grant: DP2HG010099

U.S. Department of Health & Human Services | National Institutes of Health

Grant: R01CA218668

National Institutes of Health

Grant: 3R01CA218668-04S2

Computational Methods for Identifying Non-coding Cancer Drivers

National Institutes of Health

Grant: 5R00HG008171-05

Genome engineering tools for functional screening of non-coding elements

National Institutes of Health

Grant: 3DP2HG010099-01S2

In situ functional genomics to understand transcriptional regulation

NHGRI NIH HHS

Grant: R00 HG008171

FWCI

6.15

Citation Percentile

1.0%

Influential Citations

Citation Trend

2021

2022

2023

2024

2025

2026

greenLicense: Springer TDM

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/8516442

GREENhttps://www.ncbi.nlm.nih.gov/pmc/articles/8516442

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/8516442

publisherhttps://www.nature.com/articles/s41587-021-00902-x.pdf

publisherhttps://www.nature.com/articles/s41587-021-00902-x

Fields of Study

CRISPR and Genetic EngineeringSingle-cell and spatial transcriptomicsEpigenetics and DNA MethylationMedicineBiology0301 basic medicine0303 health sciences03 medical and health sciencesBinding SitesChromatinChromatin Assembly and DisassemblyClustered Regularly Interspaced Short Palindromic RepeatsEpigenomicsGene Expression ProfilingHumansLeukemia, MyeloidNucleosomesRNA-SeqRegulatory Elements, TranscriptionalSingle-Cell AnalysisTranscription FactorsTransposases

MeSH Terms

RNA-SeqBinding SitesChromatinHumansLeukemia, MyeloidNucleosomesTranscription FactorsTransposasesGene Expression ProfilingChromatin Assembly and DisassemblyRegulatory Elements, TranscriptionalEpigenomicsSingle-Cell AnalysisClustered Regularly Interspaced Short Palindromic Repeats

Keywords

ChromatinCRISPRBiologyGeneticsChIA-PETComputational biologyCRISPR interferenceNucleosomeHeterochromatinEpigenomicsGeneCell biologyDNA methylationCas9Gene expressionBinding SitesGene Expression ProfilingTransposasesChromatin Assembly and DisassemblyNucleosomesLeukemia, MyeloidHumansClustered Regularly Interspaced Short Palindromic RepeatsRNA-SeqRegulatory Elements, TranscriptionalSingle-Cell AnalysisTranscription Factors

Additional file 1 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696667.v1figshare

Additional file 1 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696667figshare

Additional file 6 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696682.v1figshare

Additional file 6 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696682figshare

Additional file 1 of Robust differential expression testing for single-cell CRISPR screens at low multiplicity of infection

10.6084/m9.figshare.26722062.v1figshare

Additional file 1 of Robust differential expression testing for single-cell CRISPR screens at low multiplicity of infection

10.6084/m9.figshare.26722062figshare

Additional file 2 of Robust differential expression testing for single-cell CRISPR screens at low multiplicity of infection

10.6084/m9.figshare.26722065.v1figshare

Additional file 2 of Robust differential expression testing for single-cell CRISPR screens at low multiplicity of infection

10.6084/m9.figshare.26722065figshare

Additional file 3 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696673.v1figshare

Additional file 5 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696679.v1figshare

Additional file 5 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696679figshare

Additional file 4 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696676figshare

Additional file 4 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696676.v1figshare

Additional file 2 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696670figshare

Additional file 3 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696673figshare

Additional file 2 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

10.6084/m9.figshare.26696670.v1figshare

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