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Unsupervised discovery of tissue architecture in multiplexed imaging

Nature Methods(2022)10.1038/s41592-022-01657-2Source: DataRank Database

Unsupervised discovery of tissue architecture in multiplexed imaging is a research paper published in Nature Methods (2022). On theSindex it has a DataRank of 0.722. It has been cited 122 times.

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0.722DataRank · unranked

Scored on demand from live citation data

Open Access122 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (10 grants)Impact (FWCI 9.16)OA: bronzeTopics (27)Linked Datasets (24)DataCite Reuse (24)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

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Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

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Reusable (0/3)

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DataRank Breakdown

Base Score 100%Citation Network 0%

Base Score Contribution

0.722

From this paper's citation signal

Citation Network Contribution

Citation network not refreshed for this result

This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.

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Authors (7)

Samir Rustam ORCID,Juan Miguel Mosquera ORCID,Scott H. Randell ORCID,Renat Shaykhiev ORCID,André F. Rendeiro ORCID

Live enrichment

PubMed:36316562 PMC:PMC11102857 OpenAlex:https://openalex.org/W4307715791

U.S. Department of Health & Human Services | National Institutes of Health

Grant: T32CA203702

U.S. Department of Health & Human Services | National Institutes of Health

Grant: R01CA194547

Leukemia and Lymphoma Society

Grant: SCOR 7021-20

NHLBI NIH HHS

Grant: U01 HL145561

NHLBI NIH HHS

Grant: R01 HL127393

NCATS NIH HHS

Grant: UL1 TR002384

NHLBI NIH HHS

Grant: R01 HL123544

National Institutes of Health

Grant: 5R01CA194547-03

The identification and validation of mechanisms and biomarkers for relapse in diffuse large B-cell lymphoma

National Institutes of Health

Grant: 5UL1TR002384-03

Clinical and Translational Science Center

National Institutes of Health

Grant: 1T32CA203702-01A1

Molecular and Translational Oncology Research

FWCI

9.16

Citation Percentile

1.0%

Citation Trend

2022

2023

2024

2025

2026

bronzeLicense: Springer Nature TDM

journalhttps://www.nature.com/articles/s41592-022-01657-2.pdf

publisherhttps://www.nature.com/articles/s41592-022-01657-2.pdf

publisherhttps://www.nature.com/articles/s41592-022-01657-2

journalhttps://doi.org/10.1038/s41592-022-01657-2

repositoryhttps://pubmed.ncbi.nlm.nih.gov/36316562

Fields of Study

Single-cell and spatial transcriptomicsCell Image Analysis TechniquesAI in cancer detectionHumansDiagnostic ImagingTranscriptome

MeSH Terms

Diagnostic ImagingHumansTranscriptome

Keywords

BiologyComputational biologyPhenotypeSpatial organizationComputer sciencePathologyEvolutionary biologyMedicineGeneGeneticsDiagnostic Imagingcancer imagingmultiplexed imagingcell biologyHumansimaging mass cytometrybioinformaticsTranscriptome

Sustainable Development Goals

SDG 3: 3. Good health

Additional file 1 of Unsupervised spatially embedded deep representation of spatial transcriptomics

10.6084/m9.figshare.24993721.v1figshare

Additional file 1 of Unsupervised spatially embedded deep representation of spatial transcriptomics

10.6084/m9.figshare.24993721figshare

Additional file 3 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666947.v1figshare

Additional file 3 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666947figshare

Additional file 6 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

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Additional file 6 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666956figshare

Additional file 11 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666971.v1figshare

Additional file 11 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666971figshare

Additional file 5 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666953.v1figshare

Additional file 8 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

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Additional file 10 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

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Additional file 10 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666968figshare

Additional file 9 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666965.v1figshare

Additional file 9 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666965figshare

Additional file 5 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666953figshare

Additional file 7 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666959figshare

Additional file 4 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666950figshare

Additional file 8 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666962.v1figshare

Additional file 7 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666959.v1figshare

Additional file 4 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

10.6084/m9.figshare.26666950.v1figshare