A compendium of multi-omics data illuminating host responses to lethal human virus infections is a dataset published in Scientific Data (2024). On theSindex it has a DataRank of 0.560, placing it in the top 35% of the data-sharing corpus. It has been cited 18 times, with 13 citing works in its 1-hop citation network. Its calibrated FAIR score is 38/100.
Ranks in the top 35% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
No persistent identifier string is given for the compendium dataset. [majority verdict 'no' (2/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“Anderson, L. N., Eisfeld, A. J. & Waters, K. M. Modeling Host Responses to Understand Severe Human Virus Infections Program Project. Omics-Lethal Human Viruses, MERS-CoV Experiment MHAE001. PNNL DataHub (Web) https://doi.org/10.25584/ LHVMHAE001/1661938 (2021).”
The repository 'PNNL DataHub' is named as the holder of the data in the reference list. [majority verdict 'yes' (3/5 passes agreed)]
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
No identifier for the compendium dataset appears in the reference list or body text. [majority verdict 'no' (2/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Raw multi-omics data and metadata were deposited in public repositories, and we provide a central location linking the raw data with experimental metadata and ready-to-use, quality-controlled, statistically processed multi-omics datasets not previously available in any public repository.”
The statement points to 'public repositories' generically without a specific link or accession, corresponding to Colavizza category 2 (data within article/supplement) or a weak category 3. [majority verdict 'partial' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“Anderson, L. N., Eisfeld, A. J. & Waters, K. M. Modeling Host Responses to Understand Severe Human Virus Infections Program Project. Omics-Lethal Human Viruses, MERS-CoV Experiment MHAE001. PNNL DataHub (Web) https://doi.org/10.25584/ LHVMHAE001/1661938 (2021).”
The reference list constitutes an itemised inventory of datasets with identifiers, satisfying the class-1 artefact. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“Raw multi-omics data and metadata were deposited in public repositories, and we provide a central location linking the raw data with experimental metadata and ready-to-use, quality-controlled, statistically processed multi-omics datasets not previously available in any public repository.”
Data are deposited in public repositories with no stated precondition, implying unconditional availability.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“Raw multi-omics data and metadata were deposited in public repositories, and we provide a central location linking the raw data with experimental metadata and ready-to-use, quality-controlled, statistically processed multi-omics datasets not previously available in any public repository.”
The paper describes the action of depositing data in public repositories, from which open access can be inferred, but does not use an explicit access-level label. [majority verdict 'partial' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The paper deposits human data in public repositories without naming any institutional or personal gatekeeper; no controlled-access procedure is described.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
No sentence in the paper states when the data are available or how long they will persist. [majority verdict 'no' (4/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format is named for the released data. [majority verdict 'no' (4/5 passes agreed)]
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No community data or metadata standard is named in the paper. [majority verdict 'no' (3/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“mapped to the human (hg38) and viral (EBOV/G3683/KM034562.1) reference genomes”
The paper provides the GenBank accession KM034562.1 for the viral reference genome, an identifier for an external resource. [majority verdict 'yes' (4/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
The only license mentioned is a Creative Commons Attribution 4.0 International License for the article, not for the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is given to identify a specific snapshot of the data.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No code locator is provided in the text; references to software DOIs are not predicated as code availability. [majority verdict 'no' (3/5 passes agreed)]
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“Research reported in this publication was supported by the National Institute of Allergy and Infectious Disease, of the National Institutes of Health under award number U19AI106772.”
The paper states the award number U19AI106772, a specific grant identifier.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“sequenced on the Illumina HiSeq. 4000 platform”
The paper names the specific sequencing platform (Illumina HiSeq. 4000) used to produce the data.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“These primary metadata documents are publicly available and are described in more detail in the Data Records section.”
The paper states that documentation objects (primary metadata documents) are publicly available alongside the data. [majority verdict 'yes' (3/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.442
From this paper's citation signal
Citation Network Contribution
0.118
From 8 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 13 citers.
U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases
Grant: U19AI106772
NIH HHS
Grant: S10 OD026880
NIEHS NIH HHS
Grant: P30 ES010126
NIH HHS
Grant: S10 OD030463
National Institutes of Health
Grant: 5U19AI106772-03
Systems Biology Analysis of Influenza A Virus and Ebola Virus
U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases
Fields of Study
MeSH Terms
Keywords
Sustainable Development Goals