Publication, funding, and experimental data in support of Human Reference Atlas construction and usage is a dataset published in Scientific Data (2024). On theSindex it has a DataRank of 0.391, placing it in the top 46.6% of the data-sharing corpus. It has been cited 10 times, with 5 citing works in its 1-hop citation network. Its calibrated FAIR score is 77/100.
Ranks in the top 47% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“10.6084/m9.figshare.24580669.v2”— not found in the paper; verdict downgraded
The paper provides a DOI for its own dataset, which is a persistent identifier scheme. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“Figshare”
The paper names Figshare as the repository holding the data, which is a curated data repository.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“Kong, Y. X. & Börner, K. Human Reference Atlas Literature (HRAlit) Database. Figshare https://doi.org/10.6084/m9.figshare.24580669.v2 (2023).”— not found in the paper; verdict downgraded
The dataset identifier (DOI) appears as a reference-list entry, which is the strongest location. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The HRAlit database SQL file and all tables in CSV format are at Figshare21.”
The statement points to a repository record (Figshare) with a DOI, fulfilling Colavizza category 3. [majority verdict 'yes' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“Data Records”
The paper includes a section titled 'Data Records' that itemises the dataset's tables and records, forming an inventory.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The HRAlit database SQL file and all tables in CSV format are at Figshare21.”
The text provides a route to the data at Figshare with no stated precondition, indicating unconditional open access.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The HRAlit database SQL file and all tables in CSV format are at Figshare21.”
The paper describes the access action (Figshare) but does not use an explicit access-level label from the COAR vocabulary. [majority verdict 'partial' (3/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
“All experimental datasets used to construct HRAlit are publicly available, no member login is required to access this data.”
The HRAlit data is not sensitive human-subject data; it is a metadata compilation, and no gatekeeper is named because the data are publicly available.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“The HRAlit database SQL file and all tables in CSV format are at Figshare21.”
The paper states the data are available now at Figshare but does not specify how long they will persist, only the timing of availability. [majority verdict 'partial' (4/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
“CSV format”— not found in the paper; verdict downgraded
The paper states the data are provided in CSV format, which is an open, community-standard format. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
“Foundational Model of Anatomy (FMA)”
The paper names the FMA ontology, a community standard, as linked to the data's anatomical structures.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“DOIs”— not found in the paper; verdict downgraded
The paper references external resources such as publications with DOIs, providing qualified references. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (3/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
“Creative Commons Attribution 4.0 International License”
The paper attaches an open standard licence (CC BY 4.0) to the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“Kong, Y. X. & Börner, K. Human Reference Atlas Literature (HRAlit) Database. Figshare https://doi.org/10.6084/m9.figshare.24580669.v2 (2023).”— not found in the paper; verdict downgraded
The DOI includes a version suffix 'v2', which is a version token identifying the snapshot. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“https://github.com/cns-iu/hra-literature”— not found in the paper; verdict downgraded
The paper provides a machine-resolvable GitHub URL for the study's code. [downgraded to 'partial' — no verifiable quote from the paper]
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“OT2OD033756”
The paper lists specific grant numbers (e.g., OT2OD033756) from named funders.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“The HRAlit database was constructed solely using publicly available metadata”
The construction is described in generic terms without naming specific instruments, kits, or software versions.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“A data dictionary can be found in Supplemental Table S1”
The variable definitions are inside the article's supplemental material, not shipped with the data deposit. [majority verdict 'partial' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.360
From this paper's citation signal
Citation Network Contribution
0.0315
From 2 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 5 citers.
NIH HHS
Grant: OT2 OD026671
NIH HHS
Grant: OT2 OD033756
NIDDK NIH HHS
Grant: U01 DK133090
NCI NIH HHS
Grant: U24 CA268108
NIDDK NIH HHS
Grant: U24 DK135157
NIDDK NIH HHS
Grant: U2C DK114886
National Institutes of Health
Grant: 1U2CDK114886-01
Central Hub for Kidney Precision Medicine
National Institutes of Health
Grant: 3U24CA268108-03S2
SenNet Supplement - 2 -FY 2024
National Institutes of Health
Grant: 3OT2OD033756-01S1
3D Multiscale Biomolecular Human Reference Atlas Construction, Visualization and Usage [4 of 5]
National Institutes of Health
Grant: 3U01DK133090-04S1
KPMP Kidney Mapping and Atlas Project (KMAP)
National Institutes of Health
Grant: 3OT2OD026671-01S2
The Human Body Atlas: High-Resolution, Functional Mapping of Voxel, Vector, and Meta Datasets
National Institutes of Health
Grant: 5U24DK135157-02
National Institute of Diabetes and Digestive and Kidney Diseases ATLAS (D2K-ATLAS) Center as an accessible, comprehensive data portfolio for renal and genitourinary development and disease
Fields of Study
MeSH Terms
Keywords
Sustainable Development Goals