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Full-length single-cell BCR sequencing paired with RNA sequencing reveals convergent responses to pneumococcal vaccination

Communications Biology(2024)10.1038/s42003-024-06823-0Source: DataRank Database

Full-length single-cell BCR sequencing paired with RNA sequencing reveals convergent responses to pneumococcal vaccination is a research paper published in Communications Biology (2024). On theSindex it has a DataRank of 0.376. It has been cited 9 times, with 6 citing works in its 1-hop citation network.

N/A

0.376DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access9 citations · 6 citing works in its network

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Linked data & code

geo arrayexpress

Data availability

Repositories this paper deposited data in (declared in PubMed).

GEOGSE232873 GSE232873

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 1.66)OA: goldTopics (53)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 92%Citation Network 8%

Base Score Contribution

0.345

From this paper's citation signal

Citation Network Contribution

0.0305

From 3 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 6 citers.

Monitoring Immune Responses to Vaccination: A Focus on Single-Cell Analysis and Associated Challenges
Vaccines20256 citations136 referencesContributes 0.014
Single-cell sequencing reveals the mechanisms of multiple myeloma progression: clarity or confusion?
Annals of Hematology20258 citations157 referencesContributes 0.014
Human primary antibody response to vaccination follows a partially sequential class-switching program with a checkpoint at IGHG2
Cell Reports Medicine20261 citations92 referencesContributes 0.008
Alterations in BCR heavy chain CDR3 repertoire characteristics in pediatric mycoplasma pneumoniae infection
Frontiers in Cellular and Infection Microbiology20250 citations50 referencesContributes 0.000
BCRInsight: an antibody language model to decode biological signals from BCR sequences
Briefings in Bioinformatics20260 citations53 referencesContributes 0.000

Authors (15)

Yiming J. Zhang ORCID,Jin Hwan Kim ORCID,MaryAnn Murillo,Suddham Singh,Jakob Loschko

Live enrichment

PubMed:39341987 PMC:PMC11438910 OpenAlex:https://openalex.org/W4402949297

National Cancer Center

Grant: P30-CA14051

NCI NIH HHS

Grant: P30 CA014051

NIAID NIH HHS

Grant: R01 AI155630

National Institutes of Health

Grant: 5P30CA014051-17

CELL BIOLOGY--DEVELOPMENTAL PROGRAM

National Institutes of Health

Grant: 5R01AI155630-05

Structural and functional characterization of protective antibodies induced in peanut oral immunotherapy

Pfizer

FWCI

1.66

Citation Percentile

0.8%

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://www.nature.com/articles/s42003-024-06823-0.pdf

publisherhttps://www.nature.com/articles/s42003-024-06823-0.pdf

publisherhttps://www.nature.com/articles/s42003-024-06823-0

journalhttps://doi.org/10.1038/s42003-024-06823-0

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39341987

Fields of Study

T-cell and B-cell ImmunologyImmune Cell Function and InteractionImmunotherapy and Immune Responses0303 health sciences03 medical and health sciencesAnimalsMacaca mulattaPneumococcal VaccinesReceptors, Antigen, B-CellSingle-Cell AnalysisStreptococcus pneumoniaeSequence Analysis, RNAVaccinationB-LymphocytesPneumococcal Infections

MeSH Terms

AnimalsB-LymphocytesMacaca mulattaPneumococcal InfectionsReceptors, Antigen, B-CellStreptococcus pneumoniaeVaccinationSequence Analysis, RNAPneumococcal VaccinesSingle-Cell Analysis

Keywords

breakpoint cluster regionBiologyStreptococcus pneumoniaeComputational biologyAntigenVaccinationGlycoconjugateRepertoireB-cell receptorSerotypeB cellVirologyGeneticsGeneAntibodyBioinformaticsBacteriaB-LymphocytesQH301-705.5Sequence Analysis, RNAReceptors, Antigen, B-CellMacaca mulattaArticlePneumococcal InfectionsPneumococcal VaccinesAnimalsBiology (General)Single-Cell Analysis

Sustainable Development Goals

SDG 0: Good health and well-being