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Transcriptional and functional motifs defining renal function revealed by single-nucleus RNA sequencing

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2203179119Source: DataRank Database

Transcriptional and functional motifs defining renal function revealed by single-nucleus RNA sequencing is a research paper published in Proceedings of the National Academy of Sciences (2022). On theSindex it has a DataRank of 1.5. It has been cited 50 times, with 41 citing works in its 1-hop citation network.

N/A

1.5DataRank · unranked

Scored on demand from live citation data

Open Access50 citations · 41 citing works in its network

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (20 grants)OA: hybridTopics (34)IDs (PubMed, PMC)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 39%Citation Network 61%

Base Score Contribution

0.590

From this paper's citation signal

Citation Network Contribution

0.927

From 33 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 41 citers.

Benchmarking strategies for cross-species integration of single-cell RNA sequencing data
Nature Communications2023114 citations48 referencesContributes 0.099
A novel antidiuretic hormone governs tumour-induced renal dysfunction
Nature202354 citations45 referencesContributes 0.089
Renal NF-κB activation impairs uric acid homeostasis to promote tumor-associated mortality independent of wasting
Immunity202239 citations63 referencesContributes 0.059
Benchmarking strategies for cross-species integration of single-cell RNA sequencing data
bioRxiv (Cold Spring Harbor Laboratory)202211 citations44 referencesContributes 0.056
Paraneoplastic renal dysfunction in fly cancer models driven by inflammatory activation of stem cells
Proceedings of the National Academy of Sciences20247 citations37 referencesContributes 0.056

Authors (15)

Yifang Liu ORCID,Hongjie Li ORCID,Alexander J. Tarashansky ORCID,Colin H. Kalicki ORCID,Ruei‐Jiun Hung ORCID

Live enrichment

PubMed:35696569 PMC:PMC9231607

HHS | National Institutes of Health

Grant: R00AG062746

HHS | National Institutes of Health

Grant: DK107350

HHS | National Institutes of Health

Grant: DK094526

HHS | National Institutes of Health

Grant: DK110792

National Science Foundation

Grant: DBI-2035515

Cancer Prevention and Research Institute of Texas

Grant: N/A

UKRI | Biotechnology and Biological Sciences Research Council

Grant: BB/P024297/1

FlyMet.org - a tissue-based metabolomic online resource for the Drosophila and systems biology communities

UKRI | Biotechnology and Biological Sciences Research Council

Grant: BB/V011154/1

Tackling diversity: new technologies to explore insect function

NIDDK NIH HHS

Grant: U01 DK110792

Biotechnology and Biological Sciences Research Council

Grant: BB/W002442/1

NIDDK NIH HHS

Grant: U01 DK094526

NIDCD NIH HHS

Grant: R01 DC005982

NIDDK NIH HHS

Grant: U01 DK107350

National Institutes of Health

Grant: 5U01DK107350-03

The USC (Re)Building the Kidney Coordinating Center

National Institutes of Health

Grant: 4R00AG062746-03

Characterizing age-related decline of neural circuits by single-cell profiling

National Institutes of Health

Grant: 5U01DK094526-04

GUDMAP2 - Production of Mouse Strains for Gene Anatomy of the Lower Urinary Tract

National Institutes of Health

Grant: 5U01DK110792-03

Four-dimensional Modeling of Mouse and Human Nephrogenesis.

National Science Foundation

Grant: 2035515

BBSRC-NSF/BIO: Integrative analysis and Visualisation of Fly Cell Atlas datasets to enable cross-species comparisons

National Institutes of Health

Grant: 5R01DC005982-13

Assembly of the Central Olfactory Networks in Drosophila

Howard Hughes Medical Institute

hybridLicense: cc-by

publisherhttps://doi.org/10.1073/pnas.2203179119

publisherhttps://pnas.org/doi/pdf/10.1073/pnas.2203179119

repositoryhttp://eprints.gla.ac.uk/270390/2/270390.pdf

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/9231607

Europe_PMChttps://europepmc.org/articles/PMC9231607

Fields of Study

0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

KidneyStem CellsMalpighian TubulesAnimalsMiceDrosophila melanogasterDrosophila ProteinsNerve Tissue ProteinsTranscription FactorsSequence Analysis, RNARegenerationHepatocyte Nuclear Factor 4Single-Cell Analysis

Keywords

Malpighian TubulesKidney DiseaseCross-speciesNephrocytesSnrna-seqSequence Analysis, RNAStem CellsNerve Tissue ProteinsBiological SciencesKidneyMiceDrosophila melanogasterHepatocyte Nuclear Factor 4AnimalsDrosophila ProteinsRegenerationSingle-Cell AnalysisTranscription Factors