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A cloud-based training module for efficient de novo transcriptome assembly using Nextflow and Google cloud

Briefings in Bioinformatics(2024)10.1093/bib/bbae313Source: DataRank Database

A cloud-based training module for efficient de novo transcriptome assembly using Nextflow and Google cloud is a research paper published in Briefings in Bioinformatics (2024). On theSindex it has a DataRank of 0. It has been cited 1 time.

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0DataRank · unranked

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Open Access1 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (5 grants)Impact (FWCI 0.19)OA: goldTopics (33)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Ross Campbell ORCID,Valena Doe,Zelaikha Yosufzai,Joel H. Graber ORCID,Ryan P. Seaman

Live enrichment

PubMed:38941113 PMC:PMC11212313 OpenAlex:https://openalex.org/W4400119485

National Institute of General Medical Sciences of the National Institutes of Health

Grant: P20GM103423

Institutional Development Award

Administrative Supplement to the Maine INBRE

Institutional Development Award

FWCI

0.19

Citation Percentile

0.5%

Citation Trend

2024

goldLicense: cc-by

journalhttps://doi.org/10.1093/bib/bbae313

publisherhttps://doi.org/10.1093/bib/bbae313

publisherhttps://academic.oup.com/bib/article-pdf/25/4/bbae313/58357624/bbae313.pdf

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38941113

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/11212313

Fields of Study

Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsRNA modifications and cancerCloud ComputingTranscriptomeComputational BiologySoftwareHumansGene Expression ProfilingInternet

MeSH Terms

Cloud ComputingHumansSoftwareComputational BiologyInternetGene Expression ProfilingTranscriptome

Keywords

Cloud computingComputer scienceTranscriptomeTraining (meteorology)Sequence assemblyBiologyOperating systemGeneGeographyGeneticsGene expressionMeteorologyAssemblyAnnotationTraining ModuleNextflow

Sustainable Development Goals

SDG 0: Industry, innovation and infrastructure