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kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase

Bioinformatics(2023)10.1093/bioinformatics/btad110Source: DataRank Database

kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase is a research paper published in Bioinformatics (2023). On theSindex it has a DataRank of 0. It has been cited 17 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access17 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (4 grants)Impact (FWCI 1.60)OA: goldTopics (42)IDs (PubMed, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (13)

Mikayla Borton ORCID,Ben Bolduc,José P. Faria ORCID,Rory M. Flynn ORCID,Parsa Ghadermazi ORCID

Live enrichment

PubMed:36857575 OpenAlex:https://openalex.org/W4322730783

DOE BER

Grant: DE-SC0021350

DOE BER

Grant: DE-SC0023084

National Institutes of Health

Grant: R01AI143288

National Institutes of Health

Grant: 5R01AI143288-03

Microbial ecology of the inflamed intestine

FWCI

1.60

Citation Percentile

0.8%

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad110/49385190/btad110.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad110/49385190/btad110.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/39/4/btad110/57944213/btad110.pdf

journalhttps://doi.org/10.1093/bioinformatics/btad110

repositoryhttps://pubmed.ncbi.nlm.nih.gov/36857575

Fields of Study

Genomics and Phylogenetic StudiesMicrobial Metabolic Engineering and BioproductionBacteriophages and microbial interactions0206 medical engineering02 engineering and technologyMolecular Sequence AnnotationSoftwareBacteriaArchaeaMetabolomics

MeSH Terms

ArchaeaBacteriaSoftwareMetabolomicsMolecular Sequence Annotation

Keywords

DramAnnotationComputer scienceGenomeWorkflowComputational biologyProfiling (computer programming)GeneBiologyProgramming languageGeneticsDatabaseComputer hardwareArtificial intelligenceBacteriaBioinformaticsHuman GenomeBioinformatics and Computational BiologyMathematical sciencesMolecular Sequence AnnotationBiological SciencesArchaeaApplications NoteNetworking and Information Technology R&D (NITRD)Information and Computing SciencesMetabolomicsSoftware