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cloneRate: fast estimation of single-cell clonal dynamics using coalescent theory

Bioinformatics(2023)10.1093/bioinformatics/btad561Source: DataRank Database

cloneRate: fast estimation of single-cell clonal dynamics using coalescent theory is a research paper published in Bioinformatics (2023). On theSindex it has a DataRank of 0. It has been cited 13 times.

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Scored on demand from live citation data

Open Access13 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (7 grants)Impact (FWCI 3.06)OA: goldTopics (70)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (4)

Yubo Shuai,Jason Schweinsberg ORCID,Kit Curtius ORCID,Brian Johnson ORCID

Live enrichment

PubMed:37699006 PMC:PMC10534056 OpenAlex:https://openalex.org/W4386691782

NIDDK NIH HHS

Grant: P30 DK120515

NCI NIH HHS

Grant: P30 CA023100

NLM NIH HHS

Grant: T15 LM011271

National Institutes of Health

Grant: 3P30CA023100-25S4

Specialized Cancer Center Support Grant

National Institutes of Health

Grant: 5P30DK120515-04

San Diego Digestive Diseases Research Center

National Institutes of Health

Grant: 2T15LM011271-11

San Diego Biomedical Informatics Education & Research (SABER)

AGA Research Foundation

FWCI

3.06

Citation Percentile

0.9%

Influential Citations

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/39/9/btad561/51784445/btad561.pdf

GOLDhttps://academic.oup.com/bioinformatics/article-pdf/39/9/btad561/51784445/btad561.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/39/9/btad561/51784445/btad561.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad561/51529643/btad561.pdf

journalhttps://doi.org/10.1093/bioinformatics/btad561

Fields of Study

Cancer Genomics and DiagnosticsMyeloproliferative Neoplasms: Diagnosis and TreatmentAcute Myeloid Leukemia ResearchComputer ScienceMedicineBiology0206 medical engineering02 engineering and technology

MeSH Terms

Clone CellsHumansMutationNeoplasmsPhylogenySoftwareSequence Analysis, DNAClonal Evolution

Keywords

Coalescent theoryEstimationComputer scienceDynamics (music)Maximum likelihoodStatistical physicsComputational biologyAlgorithmBiologyGeneticsStatisticsMathematicsPhysicsEconomicsBioinformatics3102 Bioinformatics and Computational Biology (for-2020)Bioinformatics and Computational Biology610Bioengineering08 Information and Computing Sciences (for)Phylogeny (mesh)Mathematical SciencesClonal EvolutionInformation and Computing SciencesNeoplasms31 Biological sciences (for-2020)HumansSoftware (mesh)46 Information and computing sciences (for-2020)PhylogenyCancerHumans (mesh)Neoplasms (mesh)Clone Cells (mesh)Original Paper3 Good Health and Well Being (sdg)Mutation (mesh)Genetics (rcdc)Bioengineering (rcdc)Clonal Evolution (mesh)DNACancer (hrcs-hc)Sequence Analysis, DNABiological Sciences49 Mathematical sciences (for-2020)06 Biological Sciences (for)Clone CellsGood Health and Well BeingBioinformatics (science-metrix)01 Mathematical Sciences (for)MutationDNA (mesh)Sequence AnalysisSoftware