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SPRITE: improving spatial gene expression imputation with gene and cell networks

Bioinformatics(2024)10.1093/bioinformatics/btae253Source: DataRank Database

SPRITE: improving spatial gene expression imputation with gene and cell networks is a research paper published in Bioinformatics (2024). On theSindex it has a DataRank of 0. It has been cited 8 times.

N/A

0DataRank · unranked

Scored on demand from live citation data

Open Access8 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (14 grants)Impact (FWCI 1.49)OA: goldTopics (44)IDs (PubMed, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (3)

Rong Ma ORCID,James Zou ORCID,Eric Sun ORCID

Live enrichment

PubMed:38940132 OpenAlex:https://openalex.org/W4400140643

NSF

Grant: 1942926

CAREER: Enabling data valuation and deletion in human-centered machine learning

NIH

Grant: P30AG059307

NIH

Grant: 5RM1HG010023

NHGRI NIH HHS

Grant: RM1 HG010023

Chan-Zuckerberg Initiative

National Science Foundation Graduate Research Fellowship Program

Silicon Valley Foundation

Stanford University

Knight-Hennessy Scholars

Stanford University

Chan-Zuckerberg Initiative

Silicon Valley Foundation

National Science Foundation Graduate Research Fellowship Program

Knight-Hennessy Scholars

FWCI

1.49

Citation Percentile

0.8%

Citation Trend

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i521/58354760/btae253.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i521/58354760/btae253.pdf

journalhttps://doi.org/10.1093/bioinformatics/btae253

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38940132

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/11211834

Fields of Study

Single-cell and spatial transcriptomicsGene expression and cancer classificationBioinformatics and Genomic Networks0301 basic medicine03 medical and health sciences0206 medical engineering02 engineering and technologyAlgorithmsSoftwareGene Regulatory NetworksGene Expression ProfilingSingle-Cell AnalysisHumansTranscriptome

MeSH Terms

AlgorithmsHumansSoftwareGene Expression ProfilingGene Regulatory NetworksSingle-Cell AnalysisTranscriptome

Keywords

Sprite (computer graphics)Gene expression profilingLeverage (statistics)Computer scienceComputational biologyGene expressionSpatial analysisGeneGene regulatory networkSpatial contextual awarenessBiologyData miningGeneticsArtificial intelligenceStatisticsMathematicsSystems Biology and NetworksHumansGene Regulatory NetworksSingle-Cell AnalysisTranscriptomeAlgorithmsSoftware