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Bin2cell reconstructs cells from high resolution Visium HD data

Bioinformatics(2024)10.1093/bioinformatics/btae546Source: DataRank Database

Bin2cell reconstructs cells from high resolution Visium HD data is a research paper published in Bioinformatics (2024). On theSindex it has a DataRank of 0.675. It has been cited 89 times.

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0.675DataRank · unranked

Scored on demand from live citation data

89 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 13.43)OA: goldTopics (38)IDs (PubMed, PMC, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (0/2)

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 100%Citation Network 0%

Base Score Contribution

0.675

From this paper's citation signal

Citation Network Contribution

Citation network not refreshed for this result

This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.

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Authors (8)

Raquel Bartolome-Casado ORCID,Ioannis Sarropoulos ORCID,Chuan Xu ORCID,Nick England ORCID,Frode L. Jahnsen ORCID

Live enrichment

PubMed:39250728 PMC:PMC11419951 OpenAlex:https://openalex.org/W4402348973

Medical Research Council

Grant: MC_PC_17230

Engineering and Physical Sciences Research Council

Grant: EP/Y02978X/1

Wellcome Trust

Wellcome Sanger Institute

Wellcome Trust

Wellcome Sanger Institute

FWCI

13.43

Citation Percentile

1.0%

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/40/9/btae546/59275108/btae546.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/40/9/btae546/59275108/btae546.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae546/59066232/btae546.pdf

journalhttps://doi.org/10.1093/bioinformatics/btae546

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39250728

Fields of Study

Single-cell and spatial transcriptomicsCell Image Analysis TechniquesCancer Cells and MetastasisMiceAnimalsHumansSoftwareBrainSingle-Cell AnalysisColorectal NeoplasmsTranscriptomeGene Expression ProfilingGenomicsImage Processing, Computer-Assisted

MeSH Terms

AnimalsBrainHumansImage Processing, Computer-AssistedSoftwareColorectal NeoplasmsGene Expression ProfilingGenomicsMiceSingle-Cell AnalysisTranscriptome

Keywords

Python (programming language)Computer scienceSoftwareDocumentationSegmentationOpen sourceImage resolutionArtificial intelligenceData miningInformation retrievalComputer graphics (images)Computer visionOperating system

Sustainable Development Goals

SDG 0: Good health and well-being

Bin2cell reconstructs cells from high resolution Visium HD data

FAIR Checklist

DataRank Breakdown

Authors (8)

Funding (6 grants)

Impact

Open Access

Topics