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Xenomake: a pipeline for processing and sorting xenograft reads from spatial transcriptomic experiments

Bioinformatics(2024)10.1093/bioinformatics/btae608Source: DataRank Database

Xenomake: a pipeline for processing and sorting xenograft reads from spatial transcriptomic experiments is a research paper published in Bioinformatics (2024). On theSindex it has a DataRank of 0. It has been cited 4 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access4 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (5 grants)OA: goldTopics (25)IDs (PubMed)

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Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Katherine E. Pendleton ORCID,William Bowie ORCID,Gloria V. Echeverria ORCID,Qian Zhu ORCID,Benjamin S Strope

Live enrichment

PubMed:20725694

NIH

Grant: 1S10OD023469

National Institutes of Health

Grant: 3P30CA125123-09S3

Baylor College of Medicine Cancer Center

National Institutes of Health

Grant: 5R37CA269783-03

Metabolic adaptation in residual triple negative breast cancer following chemotherapy

National Institutes of Health

Grant: 1S10OD023469-01

High Throughput Genomic Sequencer at BCM Core Facility

National Institutes of Health

Grant: 1F31CA275397-01

Investigating the role of CRAT as a driver of triple negative breast cancer chemoresistance

goldLicense: cc-by

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae608/59748027/btae608.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/40/11/btae608/60789944/btae608.pdf

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC11583937/pdf/btae608.pdf

https://doi.org/10.1093/bioinformatics/btae608

https://doi.org/10.1101/2023.09.04.556109

Fields of Study

0206 medical engineering02 engineering and technology

Keywords

570Medical SciencesCell PhenomenaGene Expression ProfilingLife SciencesComputational BiologyGenetics and GenomicsArticleBiomedical Informatics004Applications NoteMiceMedical Molecular BiologyNeoplasmsMedical SpecialtiesMedicine and Health Sciencesand ImmunityHumansAnimalsTranscriptomeMedical GeneticsSoftwareBiological Phenomena