Pilot corpus: NIH-funded biomedical datasets. Any DOI can be scored on demand — network effects sharpen as coverage grows.

R3DMCS: a web server for visualizing structural variation in RNA motifs across experimental 3D structures from the same organism or across species

Bioinformatics(2024)10.1093/bioinformatics/btae682Source: DataRank Database

R3DMCS: a web server for visualizing structural variation in RNA motifs across experimental 3D structures from the same organism or across species is a research paper published in Bioinformatics (2024). On theSindex it has a DataRank of 0.

N/A

0DataRank · unranked

Scored on demand from live citation data

Open Access0 citations

Download PDF

Cite:

Linked data & code

rfam pdb

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (2 grants)Impact (FWCI 0.00)OA: goldTopics (34)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

FAIR checklist signals are shown for context only and do not affect DataRank scoring.

Run a calibrated FAIR evaluation for this paper →

We only score data papers we can read in full — never from an abstract alone.

Authors (2)

Craig L. Zirbel ORCID,Sri Devan Appasamy ORCID

Live enrichment

PubMed:39546379 PMC:PMC11588024 OpenAlex:https://openalex.org/W4404397387

National Institutes of Health

Grant: R01GM085328

National Institutes of Health

Grant: 5R01GM085328-03

RNA 3D Motif Search, Atlas, and Prediction from Sequence

FWCI

0.00

Citation Percentile

0.2%

goldLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae682/60686177/btae682.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae682/60686177/btae682.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/40/11/btae682/60811411/btae682.pdf

journalhttps://doi.org/10.1093/bioinformatics/btae682

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39546379

Fields of Study

RNA and protein synthesis mechanismsRNA modifications and cancerProtein Structure and Dynamics0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

Nucleic Acid ConformationRNASoftwareSequence Analysis, RNAInternetNucleotide Motifs

Keywords

RNAComputer scienceVisualizationNucleic acid structureWeb serverStructural motifComputational biologySoftwareMotif (music)BiologyBioinformaticsThe InternetData miningWorld Wide WebGeneticsProgramming languageGeneApplications NoteInternetSequence Analysis, RNANucleic Acid ConformationNucleotide Motifs

Sustainable Development Goals

SDG 0: Life in Land

R3DMCS: a web server for visualizing structural variation in RNA motifs across experimental 3D structures from the same organism or across species

FAIR Checklist

Authors (2)

Funding (2 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)