Pilot corpus: NIH-funded biomedical datasets. Any DOI can be scored on demand — network effects sharpen as coverage grows.

Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery

G3 Genes Genomes Genetics(2024)10.1093/g3journal/jkae103Source: DataRank Database

Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery is a research paper published in G3 Genes Genomes Genetics (2024). On theSindex it has a DataRank of 0.404. It has been cited 10 times, with 3 citing works in its 1-hop citation network.

N/A

0.404DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access10 citations · 3 citing works in its network

Download PDF

Cite:

Linked data & code

doi

Data availability

Repositories this paper deposited data in (declared in PubMed).

BioProjectPRJNA807270 PRJNA819394 PRJNA819399
GENBANKGCA_023375975.1 GCA_023375835.1 GCA_023375845.1
figshare10.25387/g3.25020806

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (15 grants)Impact (FWCI 10.31)OA: goldTopics (53)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

FAIR checklist signals are shown for context only and do not affect DataRank scoring.

Run a calibrated FAIR evaluation for this paper →

We only score data papers we can read in full — never from an abstract alone.

DataRank Breakdown

Base Score 89%Citation Network 11%

Base Score Contribution

0.360

From this paper's citation signal

Citation Network Contribution

0.0441

From 1 citing papers with measurable signal

Learn more about DataRank methodology →

Top 3 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 3 citers.

Elevated Blood Hemoglobin in Different Cavefish Populations Evolves Through Diverse Hemoglobin Gene Expression Patterns
Journal of Experimental Zoology Part B Molecular and Developmental Evolution20254 citations31 referencesContributes 0.052
Genomic and cellular contributions to establish the fish Hyphessobrycon heterorhabdus as an Amazonian model for ecotoxicology
Environmental Toxicology and Chemistry20250 citations81 referencesContributes 0.000
Loss of Conserved Noncoding Elements Likely Shaped the Evolution of Regressed Phenotypes in Cavefish
Genome Biology and Evolution20250 citations55 referencesContributes 0.000

Authors (11)

Edward S. Rice ORCID,X Maggs,Emma Y. Roback ORCID,Alex C. Keene ORCID,Fergal J. Martin ORCID

Live enrichment

PubMed:38771704 PMC:PMC11304944 OpenAlex:https://openalex.org/W4398183057

NIH

Grant: 1R01GM127872-01

Understanding complex trait architecture through population genomics

NIH

Grant: R24OD011198

Wellcome Trust

Grant: WT222155/Z/20/Z

National Science Foundation

Grant: 1923372

EDGE CT: NSF-BSF: Functional Genotype-Phenotype Mapping in the Mexican Blind Cavefish, Astyanax mexicanus.

National Science Foundation

Grant: IOS-1933428

National Science Foundation

Grant: CNS-1429294

NIGMS NIH HHS

Grant: R01 GM127872

National Science Foundation

Grant: 1933428

Collaborative Research: The evolution of phenotypic plasticity in sleep across variable environments

Wellcome Trust

Grant: 222155

Ensembl: A Comprehensive Reference Resource for Genomics

National Science Foundation

Grant: 1429294

MRI: Acquisition of Instrument for Data-intensive Applications with Hybrid Cloud Computing Needs

National Institutes of Health

Grant: 5R24OD011198-03

Whole genome assembly resources for aquatic models of human disease

University of Missouri

Wellcome Trust

University of Missouri

Wellcome Trust

FWCI

10.31

Citation Percentile

1.0%

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/g3journal/advance-article-pdf/doi/10.1093/g3journal/jkae103/57800889/jkae103.pdf

publisherhttps://academic.oup.com/g3journal/advance-article-pdf/doi/10.1093/g3journal/jkae103/57800889/jkae103.pdf

publisherhttps://academic.oup.com/g3journal/advance-article-pdf/doi/10.1093/g3journal/jkae103/58467970/jkae103.pdf

publisherhttps://academic.oup.com/g3journal/article-pdf/14/8/jkae103/58755869/jkae103.pdf

journalhttps://doi.org/10.1093/g3journal/jkae103

Fields of Study

Subterranean biodiversity and taxonomyGenomics and Phylogenetic StudiesMarine Ecology and Invasive Species0301 basic medicine03 medical and health sciencesAnimalsCharacidaeChromosomesCavesPhylogenyGenomeGenomicsGenetic VariationQuantitative Trait LociSyntenyPhenotype

MeSH Terms

AnimalsChromosomesPhenotypePhylogenyGenetic VariationGenomeGenomicsSyntenyQuantitative Trait LociCavesCharacidae

Keywords

BiologySyntenyEvolutionary biologyGenomeGenome evolutionCaveChromosomeComparative genomicsAdaptation (eye)GeneGenomicsGeneticsEcologyCavefishAstyanax MexicanusChromosome AssemblyCharacidaeQuantitative Trait LociGenetic VariationArticleChromosomesGenome ReportCavesPhenotypeAnimalsPhylogeny

Sustainable Development Goals

SDG 0: Life below water