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Nested likelihood-ratio testing of the nonsynonymous:synonymous ratio suggests greater adaptation in the piRNA machinery of Drosophila melanogaster compared with Drosophila ananassae and Drosophila willistoni, two species with higher repeat content

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf017Source: DataRank Database

Nested likelihood-ratio testing of the nonsynonymous:synonymous ratio suggests greater adaptation in the piRNA machinery of Drosophila melanogaster compared with Drosophila ananassae and Drosophila willistoni, two species with higher repeat content is a research paper published in G3 Genes Genomes Genetics (2025). On theSindex it has a DataRank of 0.183. It has been cited 2 times, with 2 citing works in its 1-hop citation network.

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0.183DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access2 citations · 2 citing works in its network

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Data availability

Repositories this paper deposited data in (declared in PubMed).

BioProjectPRJNA1210691
figshare10.25387/g3.28266422

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (18 grants)Impact (FWCI 1.75)OA: goldTopics (36)IDs (PubMed, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 90%Citation Network 10%

Base Score Contribution

0.165

From this paper's citation signal

Citation Network Contribution

0.0181

From 1 citing papers with measurable signal

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Top 2 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 2 citers.

Recurrent innovation of protein-protein interactions in the Drosophila piRNA pathway
The EMBO Journal20258 citations103 referencesContributes 0.021
Recurrent expansion and rapid evolution of the Drosophilid RNAi pathway in testis
bioRxiv (Cold Spring Harbor Laboratory)20250 citations94 referencesContributes 0.000

Authors (5)

Sarah B. Kingan ORCID,Daniel Garrigan ORCID,Tom Hill ORCID,Jeffrey Vedanayagam ORCID,Justin P. Blumenstiel ORCID

Live enrichment

PubMed:39982380 OpenAlex:https://openalex.org/W4407840460

NSF MCB

Grant: 1413532

Evolutionary dynamics of collateral gene silencing by piRNA

NSF MCB

Grant: 2025197

How genomic shock triggers transposition during hybrid dysgenesis

NIH-NIGMS/COBRE

Grant: P20GM103638

NIH-NIGMS/KINBRE

Grant: P20GM103418

NSF-DDIG

Grant: DEB1209536

NIH-NIGMS

Grant: R00GM137077

NIH

Grant: NIH U54 HD090216

NIH

Grant: P30 GM122731

NIH

Grant: NIH S10OD036343

Frontiers CTSA

Grant: UL1TR002366

National Institutes of Health

Grant: 1S10OD036343-01

NovaSeq X Plus Sequencing System

National Institutes of Health

Grant: 5R00GM137077-04

Selfish meiotic drive and the role of RNAi in defending intragenomic conflict

National Institutes of Health

Grant: 2P20GM103638-06

Molecular Analysis of Disease Pathways

National Institutes of Health

Grant: 5P20GM103418-22

Kansas IDeA Network of Biomedical Research Excellence (K-INBRE)

National Science Foundation

Grant: 1209536

DISSERTATION RESEARCH: Evolutionary Genomics of piRNA-Mediated Transposon Silencing in Drosophila

National Institutes of Health

Grant: 1P30GM122731-01

Molecular Regulation of Cell Development and Differentiation Phase III COBRE

National Institutes of Health

Grant: 5UL1TR002366-04

Frontiers: University of Kansas Clinical and Translational Science Institute

National Institutes of Health

Grant: 3U54HD090216-04S1

Using PCORnet to Expand the DS-CONNECT Cohort Through Healthcare System Recruitment, Incorporating Electronic Health Records, and Assessing Self-Determination

FWCI

1.75

Citation Percentile

0.8%

Citation Trend

2025

goldLicense: cc-by

journalhttps://doi.org/10.1093/g3journal/jkaf017

publisherhttps://doi.org/10.1093/g3journal/jkaf017

publisherhttps://academic.oup.com/g3journal/advance-article-pdf/doi/10.1093/g3journal/jkaf017/62047022/jkaf017.pdf

publisherhttps://academic.oup.com/g3journal/article-pdf/15/4/jkaf017/62047022/jkaf017.pdf

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39982380

Fields of Study

Chromosomal and Genetic VariationsGenomics and Phylogenetic StudiesRNA and protein synthesis mechanisms0106 biological sciences01 natural sciences

MeSH Terms

Piwi-Interacting RNAAdaptation, PhysiologicalAnimalsDNA Transposable ElementsDrosophilaDrosophila melanogasterRepetitive Sequences, Nucleic AcidLikelihood FunctionsEvolution, MolecularRNA, Small Interfering

Keywords

Piwi-interacting RNABiologyDrosophila melanogasterMelanogasterGeneticsEvolutionary biologyDrosophila (subgenus)Adaptation (eye)Transposable elementGeneGenomeNeuroscienceInvestigationEvolution, MolecularLikelihood FunctionsDNA Transposable ElementsAnimalsDrosophilaRNA, Small InterferingAdaptation, PhysiologicalRepetitive Sequences, Nucleic Acid

Sustainable Development Goals

SDG 0: Life in Land