A highly contiguous genome assembly for the pocket mouse Perognathus longimembris longimembris is a dataset published in Journal of Heredity (2023). On theSindex it has a DataRank of 0.165, placing it in the top 70.3% of the data-sharing corpus. It has been cited 2 times. Its calibrated FAIR score is 71/100.
Ranks in the top 70% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“10.5061/dryad.zs7h44jgc”
The paper provides a DOI (10.5061/dryad.zs7h44jgc) for the Dryad repository, which is a persistent identifier in a recognised scheme. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“Data generated in this study are available under NCBI BioProject PRJNA777209.”
The paper names NCBI (a curated repository) as the holder of the primary data.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“Data generated in this study are available under NCBI BioProject PRJNA777209.”
The dataset identifiers appear only in the body text (Data Availability section) and not as a reference-list entry.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Data generated in this study are available under NCBI BioProject PRJNA777209.”
The data-availability statement points to a repository record (NCBI BioProject with accession), which is Colavizza category 3.
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“Table 2. Quality metrics of the final primary and the alternate assemblies mPerLon1.1.”
The paper includes a table (Table 2) that itemises the assembly metrics, providing an itemised inventory of the dataset's characteristics.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“Data generated in this study are available under NCBI BioProject PRJNA777209.”
The text gives a route to the data (NCBI BioProject) with no stated precondition such as embargo, registration, or application.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“Data generated in this study are available under NCBI BioProject PRJNA777209.”
The paper describes where the data can be accessed (NCBI BioProject) but does not apply an explicit access-level label such as 'open access' or 'publicly available'.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are from a non-human organism (pocket mouse) and are not sensitive; no gatekeeper is named or required.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“Data generated in this study are available under NCBI BioProject PRJNA777209.”
The paper states that the data are available now but does not specify how long they will persist; only availability timing is given.
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
The paper does not explicitly name any file format (e.g., FASTA, FASTQ) for the released data, only the sequencing platforms and repository accessions.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
The paper does not name any data or metadata community standard from FAIRsharing or a controlled vocabulary; it mentions only tools and reference datasets. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“GCF_023159225.1”
The paper provides an identifier (GCF_023159225.1) for the P. l. pacificus assembly, a resource other than the study's own dataset.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
The paper does not state any licence or terms of use for the data; the CC-BY-NC licence applies only to the article itself.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“producing version mPerLon1.1”
The paper explicitly names the version of the assembly (mPerLon1.1), which pins the snapshot. [majority verdict 'yes' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“www.github.com/ccgproject/ccgp_assembly”
The paper provides a machine-resolvable code repository URL (GitHub) for the assembly scripts.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“UC Award ID RSI-19-690224”
The paper gives an award/grant number (UC Award ID RSI-19-690224) attached to a named funder.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“We constructed a HiFi SMRTbell library (PacBio) with an average fragment size of 15 to 20 kb and sequenced it using six 8M SMRT cells on the PacBio Sequel II platform.”
The paper names specific instruments and platforms (PacBio Sequel II, Illumina NovaSeq 6000) and kits (Nanobind Tissue Big DNA kit) used to produce the data. [majority verdict 'yes' (4/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
The paper does not mention any README, data dictionary, codebook, or schema file shipped with the data; no documentation object is named. [majority verdict 'no' (3/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.165
From this paper's citation signal
Citation Network Contribution
0
Citation network not refreshed for this result
This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.
Learn more about DataRank methodology →National Institutes of Health
Grant: 1S10OD010786-01
Acquisition of Covaris E220 and Sciclone G3 systems for high throughput sequencin
NIH HHS
Grant: S10 OD010786
FWCI
0.18
Citation Percentile
0.5%
Citation Trend
Fields of Study
MeSH Terms
Keywords
Sustainable Development Goals