Footprints of Worldwide Adaptation in Structured Populations of Drosophila melanogaster Through the Expanded DEST 2.0 Genomic Resource is a dataset published in Molecular Biology and Evolution (2025). On theSindex it has a DataRank of 0.396, placing it in the top 46.2% of the data-sharing corpus. It has been cited 13 times, with 7 citing works in its 1-hop citation network. Its calibrated FAIR score is 79/100.
Ranks in the top 46% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“Supplementary datasets can be found in Zenodo at https://doi.org/10.5281/zenodo.13731977 .”
The paper provides a DOI for the supplementary datasets in Zenodo, which is a persistent identifier. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“All new sequences reported here for the first time are available on the SRA ( https://www.ncbi.nlm.nih.gov/sra ) at PRJNA993612 and PRJNA1263695.”
The paper names the Sequence Read Archive (SRA) as the repository for the new sequence data. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“All new sequences reported here for the first time are available on the SRA ( https://www.ncbi.nlm.nih.gov/sra ) at PRJNA993612 and PRJNA1263695.”
The dataset identifiers (SRA accessions and Zenodo DOI) appear only in the body text, not in the reference list. [majority verdict 'partial' (4/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“All new sequences reported here for the first time are available on the SRA ( https://www.ncbi.nlm.nih.gov/sra ) at PRJNA993612 and PRJNA1263695. Code is available in GitHub at: https://github.com/DEST-bio/DESTv2_data_paper and https://github.com/DEST-bio/DESTv2 . All outputs from the DEST 2.0 pipeline can be found at https://dest.bio . Supplementary datasets can be found in Zenodo at https://doi.org/10.5281/zenodo.13731977 .”
The statement points to repository records with accessions and DOIs (Colavizza category 3). [majority verdict 'yes' (3/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“Table 1 SNP calling information for DEST 2.0 across major autosomes and chromosome X”
The paper includes Table 1, which is an itemised inventory of SNP calling information for the dataset.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“All new sequences reported here for the first time are available on the SRA ( https://www.ncbi.nlm.nih.gov/sra ) at PRJNA993612 and PRJNA1263695.”
The access route is given with no stated precondition: the data are directly available at the SRA. [majority verdict 'yes' (3/5 passes agreed)]
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“All data, tools, and supporting resources for the DEST 2.0 release... are freely available through the website ( https://dest.bio ).”— not found in the paper; verdict downgraded
The paper labels the data as 'freely available', which is a natural-language equivalent of open access. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are from Drosophila, not human subjects, so no gatekeeper is needed or named.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper does not state any persistence commitment or retention period for the data. [majority verdict 'no' (3/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
“Bulk downloads of all compiled tracks are available in BigWig format ( Kent et al. 2010 ), and Pool-Seq files (in VCF format) can be accessed through a dedicated data directory.”
The paper names BigWig and VCF as file formats, both of which are open and community-standard.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No named data or metadata community standard is explicitly applied to the data; FlyBase is a database, not a standard.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
No identifier for a non-own resource is provided in the text; only references to other works are given.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No reuse license is stated for the data itself; the CC-BY-NC license applies only to the article. [majority verdict 'no' (3/5 passes agreed)]
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“the current DEST release (version 2.0)”
The paper explicitly states 'version 2.0' as a version token for the dataset. [majority verdict 'yes' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“Code is available in GitHub at: https://github.com/DEST-bio/DESTv2_data_paper and https://github.com/DEST-bio/DESTv2 .”
The paper provides GitHub URLs for the code, which are machine-resolvable locators.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“National Institutes of Health R35 GM119686”
The paper lists multiple grant numbers, e.g., R35 GM119686 from NIH.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“We used the PoolSNP program to call SNPs in our dataset.”
The paper names the PoolSNP program as a specific tool used to call SNPs. [majority verdict 'yes' (3/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“Table 1 SNP calling information for DEST 2.0 across major autosomes and chromosome X”
Variable definitions are provided inside the article (Table 1), not as a separate documentation object shipped with the data. [majority verdict 'partial' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.396
From this paper's citation signal
Citation Network Contribution
0
From 0 citing papers with measurable signal
This paper's DataRank is currently driven only by its base citation score. None of the citing papers had measurable citation signal.
Learn more about DataRank methodology →Horizon Europe project FAIRiCUBE
Grant: 101059238
F.A.I.R. information cube
Horizon Europe project FAIRiCUBE
Grant: 2R35GM11816506
Swiss National Science Foundation
Grant: 31003A-182262
Swiss National Science Foundation
Grant: 310030_219283
Swiss National Science Foundation
Grant: FZEB-0-214654
National Institutes of Health
Grant: R35 GM119686
National Institutes of Health
Grant: 2145688
CAREER: Backyard Evolution across a Seasonal Metapopulation in Drosophila
National Institutes of Health
Grant: PID2020-115874GB-I00
National Institutes of Health
Grant: MICIU/AEI /10.13039/501100011033
National Institutes of Health
Grant: PID2023-148838NB-I00
National Institutes of Health
Grant: 2021 SGR 00417
Ministerio de Ciencia e Innovación of Spain
Grant: MCIN/AEI/10.13039/501100011033
Ministerio de Ciencia e Innovación of Spain
Grant: PID2020-113168GB-I00
Comissió Interdepartamental de Recerca I Innovació Tecnològica
Grant: 2021SGR00279
Ministry of Science
Grant: 451-03-66/2024-03/200007
Ministry of Science
Grant: PID2021-127107NB-I00
Austrian Science Funds
Grant: 10.55776/P32935
Austrian Science Funds
Grant: 10.55776/P33734
German Science Foundation
Grant: FR2973/11-1
Biotechnology and Biological Sciences Research Council
Grant: BB/T007516/1
An integrated approach to genome evolution using the Drosophila model
Pontificia Universidad Católica del Ecuador
Grant: QINV0196-IINV529010100
Pontificia Universidad Católica del Ecuador
Grant: VR-2015-04680
Pontificia Universidad Católica del Ecuador
Grant: VR-2020-05412
Deutsche Forschungsgemeinschaft
Grant: 255619725
Deutsche Forschungsgemeinschaft
Grant: 503272152
Academy of Finland project
Grant: 322980
Genomic basis of stress tolerance
Academy of Finland project
Grant: 451-03-65/2024-03/ 200178
Academy of Finland project
Grant: 451-03-47/2023-01/200178
NERC
Grant: NE/V001566/1
Identifying the genetic targets of sexual selection
Bettencourt Schueller Foundation
Grant: #61-1673
Jane Coffin Childs Memorial Fund for Medical Research
Grant: PID2020-119255GB-I00
Ministry of Economy and Competitiveness
Grant: SEV-2015-0533
Ministry of Economy and Competitiveness
Grant: CEX2019-000917
Australian Research Council
Grant: DP190102512
Discovery Projects - Grant ID: DP190102512
EMBO
Grant: ALT 248-02018
ANR
Grant: ANR-20-CE02-011-01
Swiss National Science Foundation
Grant: 219283
The Role of Adaptive Inversion Polymorphisms in their Ancestral Range
Swiss National Science Foundation
Grant: 310030
Swiss National Science Foundation
Grant: 182262
NIGMS NIH HHS
Grant: R35 GM118165
Ministry of Education, Science and Technological Development of Republic of Serbia
Grant: 200178
Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 451-03-68/2020-14/200178 (University of Belgrade, Faculty of Biology)
Swiss National Science Foundation
Grant: 101059
Prävention von Rechtsextremismus und ethnischer Gewalt an Schulen. Eine Interventionsstudie zur Evaluation von Lehrerfortbildungsmassnahmen in der Schweiz
Swiss National Science Foundation
Grant: 118165
Mitogenic and growth-promoting hormones: do they regulate development, growth and function of immune organs in fish ?
Ministry of Education, Science and Technological Development of Republic of Serbia
Grant: 200007
Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 451-03-68/2020-14/200007 (University of Belgrade, Institute for Biological Research 'Siniöa Stankovic')
Swiss National Science Foundation
Grant: 119686
La répartition asymétrique des compétences législatives en Espagne et au Royaume-Uni - vers une nouvelle forme de fédéralisme
Swiss National Science Foundation
Grant: 214568
Migrant Birth Kit
National Institutes of Health
Grant: 5R35GM119686-05
The genetic and physiological architecture of rapid and cyclic adaptation
Deutsche Forschungsgemeinschaft
Grant: unidentified
unidentified
CRI Core Research Fellowship
European Regional Development Fund
Departament de Recerca i Universitats
University of Vermont
Departament de Recerca i Universitats
European Regional Development Fund
University of Vermont
CRI Core Research Fellowship
FWCI
12.57
Citation Percentile
1.0%
Citation Trend
Fields of Study
MeSH Terms
Keywords