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TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses

Nucleic Acids Research(2020)10.1093/nar/gkaa243Source: DataRank Database

TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses is a research paper published in Nucleic Acids Research (2020). On theSindex it has a DataRank of 0. It has been cited 63 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access63 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (3 grants)Impact (FWCI 3.50)OA: goldTopics (43)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (2)

Igor B. Zhulin ORCID,Vadim M. Gumerov ORCID

Live enrichment

PubMed:32282909 PMC:PMC7319448 OpenAlex:https://openalex.org/W3016097831

NIDCR NIH HHS

Grant: R01 DE024463

NIGMS NIH HHS

Grant: R35 GM131760

National Institutes of Health

Grant: 5R35GM131760-05

Computational Genomics of Signal Transduction

FWCI

3.50

Citation Percentile

0.9%

Citation Trend

2018

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2020

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2026

goldLicense: cc-by

journalhttps://academic.oup.com/nar/article-pdf/48/W1/W72/33433028/gkaa243.pdf

journalhttps://doi.org/10.1093/nar/gkaa243

repositoryhttps://pubmed.ncbi.nlm.nih.gov/32282909

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/7319448

Europe_PMChttps://europepmc.org/articles/PMC7319448

Fields of Study

Genomics and Phylogenetic StudiesMachine Learning in BioinformaticsRNA and protein synthesis mechanisms0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

Protein DomainsBacterial ProteinsGenes, BacterialPhylogenySoftwareGenes, ArchaealArchaeal ProteinsSequence Analysis, Protein

Keywords

BiologyProtein function predictionPhylogenetic treeContext (archaeology)Computational biologySet (abstract data type)Function (biology)Domain (mathematical analysis)Tree (set theory)Task (project management)Protein domainPhylogeneticsProtein superfamilyArchitecture domainGeneProtein functionComputer scienceEvolutionary biologyGeneticsSoftwareSoftware architectureBacterial ProteinsProtein DomainsGenes, BacterialSequence Analysis, ProteinArchaeal ProteinsWeb Server IssuePhylogenyGenes, Archaeal

Sustainable Development Goals

SDG 0: Sustainable cities and communities