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Inference and multiscale model of epithelial-to-mesenchymal transition via single-cell transcriptomic data

Nucleic Acids Research(2020)10.1093/nar/gkaa725Source: DataRank Database

Inference and multiscale model of epithelial-to-mesenchymal transition via single-cell transcriptomic data is a research paper published in Nucleic Acids Research (2020). On theSindex it has a DataRank of 0. It has been cited 73 times.

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Open Access73 citations

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Enrichment:Funding (9 grants)Impact (FWCI 3.95)OA: goldTopics (75)Linked Datasets (8)DataCite Reuse (8)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

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Accessible (1/2)

Open Access

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Authors (4)

Shuxiong Wang ORCID,Peijie Zhou ORCID,Qing Nie ORCID,Yutong Sha ORCID

Live enrichment

PubMed:32870263 PMC:PMC7515733 OpenAlex:https://openalex.org/W3081981716

National Institutes of Health

Grant: U01AR073159

National Institutes of Health

Grant: R01AR044882

National Institutes of Health

Grant: U54CA217378

National Science Foundation

Grant: DMS1763272

Simons Foundation

Grant: 594598

National Institutes of Health

Grant: 5U54CA217378-05

Complexity, Cooperation and Community in Cancer

National Institutes of Health

Grant: 5R01AR044882-02

REGULATORY ROLE OF OCTAMER BINDING PROTEINS IN EPIDERMIS

National Science Foundation

Grant: 1763272

NSF-Simons Center for Multiscale Cell Fate Research

National Institutes of Health

Grant: 5U01AR073159-02

Multiscale Models of Wound Cell Plasticity for Regeneration

FWCI

3.95

Citation Percentile

1.0%

Citation Trend

2018

2020

2021

2022

2023

2024

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/nar/article-pdf/48/17/9505/33787256/gkaa725.pdf

publisherhttps://academic.oup.com/nar/article-pdf/48/17/9505/33787256/gkaa725.pdf

publisherhttp://academic.oup.com/nar/article-pdf/48/17/9505/33787256/gkaa725.pdf

journalhttps://doi.org/10.1093/nar/gkaa725

repositoryhttps://pubmed.ncbi.nlm.nih.gov/32870263

Fields of Study

Single-cell and spatial transcriptomicsGene Regulatory Network AnalysisCancer Cells and Metastasis0301 basic medicine03 medical and health sciences0303 health sciencesAnimalsCell DifferentiationEmbryonic Stem CellsEpithelial-Mesenchymal TransitionGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHead and Neck NeoplasmsHumansMiceModels, BiologicalSingle-Cell AnalysisSkin NeoplasmsSquamous Cell Carcinoma of Head and Neck

MeSH Terms

Squamous Cell Carcinoma of Head and NeckAnimalsCell DifferentiationHead and Neck NeoplasmsHumansModels, BiologicalSkin NeoplasmsGene Expression Regulation, NeoplasticGene Expression ProfilingMiceGene Regulatory NetworksEmbryonic Stem CellsEpithelial-Mesenchymal TransitionSingle-Cell Analysis

Keywords

BiologyTranscriptomeComputational biologyInferenceEpithelial–mesenchymal transitionCellSingle-cell analysisGene regulatory networkTransition (genetics)Computer scienceArtificial intelligenceGeneGeneticsGene expressionEpithelial-Mesenchymal TransitionSkin NeoplasmsBioengineeringModels, BiologicalMiceModelsInformation and Computing Sciences2.1 Biological and endogenous factorsAnimalsHumansGene Regulatory NetworksEmbryonic Stem CellsNeoplasticSquamous Cell Carcinoma of Head and NeckGene Expression ProfilingCell DifferentiationBiological SciencesBiologicalEnvironmental sciencesGene Expression Regulation, NeoplasticNetworking and Information Technology R&D (NITRD)Gene Expression RegulationChemical sciencesHead and Neck NeoplasmsBiochemistry and Cell BiologyGeneric health relevanceDevelopmental Biology

Sustainable Development Goals

SDG 0: Peace, Justice and strong institutions

Additional file 1 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606120.v1figshare

Additional file 1 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606120figshare

Additional file 2 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606123figshare

Additional file 2 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606123.v1figshare

Additional file 4 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606129figshare

Additional file 4 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606129.v1figshare

Additional file 3 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606126.v1figshare

Additional file 3 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

10.6084/m9.figshare.22606126figshare

Inference and multiscale model of epithelial-to-mesenchymal transition via single-cell transcriptomic data

FAIR Checklist

Authors (4)

Funding (9 grants)

Impact

Open Access

Topics

Linked Datasets (8)

Annotations (Europe PMC)