Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast is a dataset published in Nucleic Acids Research (2021). On theSindex it has a DataRank of 0.511, placing it in the top 37.8% of the data-sharing corpus. It has been cited 14 times, with 6 citing works in its 1-hop citation network. Its calibrated FAIR score is 58/100.
Ranks in the top 38% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“Raw and normalized microarray data were deposited in GEO ( GSE119174 , 312 samples), and ArrayExpress (E-MTAB-7191, 16 samples).”
The paper provides GEO accession GSE119174, a persistent identifier scheme.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“Raw and normalized microarray data were deposited in GEO ( GSE119174 , 312 samples), and ArrayExpress (E-MTAB-7191, 16 samples).”
GEO and ArrayExpress are named data repositories.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“Raw and normalized microarray data were deposited in GEO ( GSE119174 , 312 samples), and ArrayExpress (E-MTAB-7191, 16 samples).”
The dataset identifier appears in the body text but not as a reference-list entry.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Raw and normalized microarray data were deposited in GEO ( GSE119174 , 312 samples), and ArrayExpress (E-MTAB-7191, 16 samples).”
The statement points to public repositories with accessions (Colavizza category 3). [majority verdict 'yes' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“Raw and normalized microarray data were deposited in GEO ( GSE119174 , 312 samples), and ArrayExpress (E-MTAB-7191, 16 samples).”
The dataset's content and size are stated in running prose but not in an itemised inventory.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“Raw and normalized microarray data were deposited in GEO ( GSE119174 , 312 samples), and ArrayExpress (E-MTAB-7191, 16 samples).”
The text gives a route to the data (GEO/ArrayExpress) with no stated precondition.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“Raw and normalized microarray data were deposited in GEO ( GSE119174 , 312 samples), and ArrayExpress (E-MTAB-7191, 16 samples).”
The paper states the action of depositing data in repositories but does not label the access level with a standard vocabulary term. [majority verdict 'partial' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not human-subject or sensitive, and no gatekeeper is named in the text.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper neither states a persistence commitment nor an availability timing for the data. [majority verdict 'no' (3/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format is named for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data or metadata community standard (e.g., MIAME, BIDS) is named for the generated data. [majority verdict 'no' (3/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
No identifier for a non-own resource is provided in the text.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No license is explicitly attached to the data; the CC-BY-NC license applies to the article, not the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
Neither a version token nor a date is provided to pin the snapshot of the data.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No locator is given for the study's own code; only third-party tools are named.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“ANR GENO-GIM, CLEANMD and DEFineNMD [ANR-08-JCJC-0019, ANR-14-CE10-0014, ANR-18-CE11-0003] from the French ‘Agence Nationale de la Recherche’”
Award numbers are given for the funding sources.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Barcode DNA relative levels were measured using custom microarrays (Agilent Technologies, California, USA) and the collected images were processed with GenePix Pro 6 (Molecular Devices, California, USA) and analysed using R (32).”— not found in the paper; verdict downgraded
The text names specific instruments and software used to produce the data. [downgraded to 'partial' — no verifiable quote from the paper]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, codebook) is named as accompanying the data, and no variable-definition table exists inside the article.
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.406
From this paper's citation signal
Citation Network Contribution
0.104
From 5 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 6 citers.
Agence Nationale de la Recherche
Grant: ANR-08-JCJC-0019
Agence Nationale de la Recherche
Grant: ANR-14-CE10-0014
Molecular mechanisms and impact of nonsense mediated mRNA decay on the RNA landscape in eukaryotes
Agence Nationale de la Recherche
Grant: ANR-18-CE11-0003
Structural dynamics of detector and effector NMD complexes
Institut Pasteur
FWCI
1.33
Citation Percentile
0.8%
Citation Trend
Fields of Study
MeSH Terms
Keywords
Additional file 5 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 7 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 4 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 5 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 6 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 6 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 7 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 2 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 4 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 1 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 3 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 2 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 3 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae
Additional file 1 of Genome-wide screen identifies new set of genes for improved heterologous laccase expression in Saccharomyces cerevisiae