The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease is a dataset published in Nucleic Acids Research (2022). On theSindex it has a DataRank of 4.6, placing it in the top 4.8% of the data-sharing corpus. It has been cited 457 times, with 100 citing works in its 1-hop citation network. Its calibrated FAIR score is 46/100.
Ranks in the top 5% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“IMPC FTP data releases: http://ftp.ebi.ac.uk/pub/databases/impc/”
The only location given is an FTP URL, not a persistent identifier scheme.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“IMPC Web Portal: https://www.mousephenotype.org/”
The paper names the IMPC Web Portal as the host, which is a project website, not a curated repository.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“IMPC FTP data releases: http://ftp.ebi.ac.uk/pub/databases/impc/”
The dataset identifier (URL) appears only in the body text of the Data Availability section, not as a reference-list entry. [majority verdict 'partial' (3/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“IMPC Web Portal: https://www.mousephenotype.org/ IMPC FTP data releases: http://ftp.ebi.ac.uk/pub/databases/impc/”
The data-availability statement points to a public repository (FTP link) for archived data. [majority verdict 'yes' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“Table 1. IMPC Data Release 17 (DR17; 19 July 2022) statistics covering genes, associated phenotypes and the procedures supporting the data collection and QC”
The paper includes an itemised table (Table 1) that inventories the dataset's contents. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“All data collected by the IMPC is freely available and several access channels are provided, based on the individual needs of the users - ranging from individual items to complete data releases.”
The text states the data are freely available with no stated precondition.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“All data collected by the IMPC is freely available”
The paper explicitly labels the data as 'freely available', which is a natural-language equivalent of 'open access'.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are from mouse phenotyping and are openly available; no gatekeeper is named or needed.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“All data collected by the IMPC is freely available”
The paper states the data are available now but does not commit to a retention period, only availability timing. [majority verdict 'partial' (3/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format is named for the released data; only generic terms like 'data points' and 'images' are used.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
“Standardisation and use of established ontologies underpin the integration and publishing of the resource. The International Mouse Phenotyping Resource of Standardised Screens (IMPReSS) database drives the validation of the raw data, while the Mammalian Phenotype Ontology (MP) is used to capture mammalian phenotypes”— not found in the paper; verdict downgraded
The paper names the Mammalian Phenotype Ontology and Human Phenotype Ontology as community standards. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“The Mammalian Phenotype Ontology: https://github.com/mgijax/mammalian-phenotype-ontology”
The paper provides a URL for the external ontology, which is a qualified reference to another resource. [majority verdict 'yes' (3/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No licence for the data is stated; the article's CC BY licence does not apply to the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“Table 1. IMPC Data Release 17 (DR17; 19 July 2022) statistics”
The paper explicitly names 'Data Release 17' as a version token for the dataset.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No code locator is provided for the study's own software; only third-party tools and APIs are mentioned.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“National Institutes of Health (NIH) [2UM1HG006370-11]”
A specific grant number is given for the funding source.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“The IMPC phenotyping protocols are standardised and are available on IMPReSS.”
The paper describes the pipeline in generic terms without naming specific instruments, kits, or software versions. [majority verdict 'partial' (3/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, codebook) is said to accompany the data, and no variable-definition table is present in the article. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.919
From this paper's citation signal
Citation Network Contribution
3.7
From 100 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 100 citers.
National Institutes of Health
Grant: 2UM1HG006370-11
Mouse Phenotyping Informatics Infrastructure - Data acquisition, integration, analysis and translation of high throughput mammalian phenotyping data.
Fields of Study
Keywords
Sustainable Development Goals
Additional file 1 of Empowering biologists to decode omics data: the Genekitr R package and web server
Additional file 1 of Empowering biologists to decode omics data: the Genekitr R package and web server
Additional file 2 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 2 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 2 of Genetic effects of sequence-conserved enhancer-like elements on human complex traits
Additional file 2 of Genetic effects of sequence-conserved enhancer-like elements on human complex traits
Additional file 3 of Genetic effects of sequence-conserved enhancer-like elements on human complex traits
Additional file 3 of Genetic effects of sequence-conserved enhancer-like elements on human complex traits
Additional file 1 of Genetic effects of sequence-conserved enhancer-like elements on human complex traits
Additional file 1 of Genetic effects of sequence-conserved enhancer-like elements on human complex traits
Additional file 6 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 6 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 4 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 5 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 1 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 3 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 5 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 3 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 4 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity
Additional file 1 of Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity