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The crystal structure of bacteriophage λ RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins

Nucleic Acids Research(2024)10.1093/nar/gkae212Source: DataRank Database

The crystal structure of bacteriophage λ RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins is a research paper published in Nucleic Acids Research (2024). On theSindex it has a DataRank of 0.357. It has been cited 6 times, with 6 citing works in its 1-hop citation network.

N/A

0.357DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access6 citations · 6 citing works in its network

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Linked data & code

uniprot pdb

Data availability

Repositories this paper deposited data in (declared in PubMed).

PDB8TWQ

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (22 grants)Impact (FWCI 1.99)OA: goldTopics (50)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 82%Citation Network 18%

Base Score Contribution

0.292

From this paper's citation signal

Citation Network Contribution

0.0653

From 3 citing papers with measurable signal

Learn more about DataRank methodology →

Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 6 citers.

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Nature Microbiology202523 citations102 referencesContributes 0.031
Lambdoid phages with abundant Chi recombination hotspots reflect diverse viral strategies for recombination-dependent growth
Genome Research20253 citations105 referencesContributes 0.013
Phage-mediated just-in-time circuit amplification and delivery for recombinant expression of toxic proteins
bioRxiv (Cold Spring Harbor Laboratory)20250 citations61 referencesContributes 0.000
Prophage-encoded RexAB-type phage defense system in Pseudomonas putida
Scientific Reports20260 citations67 referencesContributes 0.000

Authors (12)

Carl J. Schiltz ORCID,Jing Sun ORCID,Christopher J. Hosford ORCID,Virginia M. Johnson ORCID,Hao Pan ORCID

Live enrichment

PubMed:38554102 PMC:PMC11077077 OpenAlex:https://openalex.org/W4393339812

National Institutes of Health

Grant: GM120242

National Institutes of Health

Grant: GM103485

National Institutes of Health

Grant: P41 GM103403

National Institutes of Health

Grant: S10 RR029205

National Institutes of Health

Grant: 1R24GM146107

National Cancer Institute

Grant: 75N91019D00024

National Science Foundation

Grant: DMR1332208

Argonne National Laboratory

Grant: DE-AC02-06CH11357

National Institute of Food and Agriculture

Grant: 2020-67034-31750

NIGMS NIH HHS

Grant: R01 GM120242

NIGMS NIH HHS

Grant: R24 GM146107

NIGMS NIH HHS

Grant: P30 GM124166

NIGMS NIH HHS

Grant: P41 GM103485

National Institutes of Health

Grant: 5P41GM103403-15

NE-CAT Center for Advanced Macromolecular Crystallography

National Science Foundation

Grant: 1332208

OPERATION OF CORNELL HIGH ENERGY SYNCHROTRON SOURCE (CHESS)

National Institutes of Health

Grant: 5R24GM146107-04

National Biomedical Resource for Electron-Spin Resonance Spectroscopy (ACERT)

National Institutes of Health

Grant: 4P41GM103485-34

Macromolecular Diffraction Resource: MacCHESS

National Institutes of Health

Grant: 1S10RR029205-01

Pixel Array Detector for X-ray Crystallography

National Institutes of Health

Grant: 5R01GM120242-03

Structural and Functional Characterization of the McrBC Restriction System

Department of Health and Human Services

HHS

FWCI

1.99

Citation Percentile

0.8%

Citation Trend

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkae212/57125452/gkae212.pdf

publisherhttps://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkae212/57125452/gkae212.pdf

publisherhttps://academic.oup.com/nar/article-pdf/52/8/4659/57446331/gkae212.pdf

journalhttps://doi.org/10.1093/nar/gkae212

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38554102

Fields of Study

Bacteriophages and microbial interactionsEnzyme Structure and FunctionDNA and Nucleic Acid Chemistry0301 basic medicine0303 health sciences03 medical and health sciencesBacteriophage lambdaCrystallography, X-RayViral ProteinsDNA-Binding ProteinsModels, MolecularProtein BindingProtein MultimerizationDNA, ViralMutationLysogenyEscherichia coliDNA

MeSH Terms

DNADNA-Binding ProteinsDNA, ViralEscherichia coliLysogenyModels, MolecularMutationBacteriophage lambdaProtein BindingViral ProteinsCrystallography, X-RayProtein Multimerization

Keywords

BiologyBacteriophageDNADNA-binding proteinComputational biologyGeneticsVirologyEscherichia coliGeneModels, MolecularCrystallography, X-RayBacteriophage lambdaDNA-Binding ProteinsViral ProteinsStructural BiologyDNA, ViralMutationProtein MultimerizationLysogenyProtein Binding

Sustainable Development Goals

SDG 0: Reduced inequalities

The crystal structure of bacteriophage λ RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins

FAIR Checklist

DataRank Breakdown

Top 5 citers driving the network score

Authors (12)

Funding (22 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)