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The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch

Nucleic Acids Research(2024)10.1093/nar/gkae231Source: DataRank Database

The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch is a research paper published in Nucleic Acids Research (2024). On theSindex it has a DataRank of 0. It has been cited 7 times.

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Enrichment:Funding (17 grants)OA: goldTopics (31)IDs (PubMed, PMC)Annotations (4)SDGs (1)

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Open Access

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Reusable (0/3)

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Authors (9)

Elise N White ORCID,Konstantin Kuznedelov ORCID,Luyi Cheng ORCID,Angela M Yu ORCID,Rivaan Kakkaramadam ORCID

Live enrichment

PubMed:38567721 PMC:PMC11077080

National Institutes of Health

Grant: T32GM008449

National Institutes of Health

Grant: R01 GM10407

Tri-Institutional Training Program in Computational Biology and Medicine

Grant: T32GM083937

National Science Foundation

Grant: 1914567

Collaborative Research: Uncovering How Riboswitches Exploit Out-of-Equilibrium RNA Folding Pathways to Make Genetic Decisions

National Science Foundation

Grant: 1914596

Collaborative Research: Uncovering How Riboswitches Exploit Out-of-Equilibrium RNA Folding Pathways to Make Genetic Decisions

National Science Foundation

Grant: 2138259

Track 1: ACCESS Resource Allocations Marketplace and Platform Services (RAMPS)

National Science Foundation

Grant: 2138286

Track 2: Customized Multi-tier Assistance, Training, and Computational Help (MATCH) for End User ACCESS to CI

National Science Foundation

Grant: 2138307

Track 3: COre National Ecosystem for CyberinfrasTructure (CONECT)

National Science Foundation

Grant: 2137603

Track 4: Advanced CI Coordination Ecosystem: Monitoring and Measurement Services

National Science Foundation

Grant: 2138296

ACO: An Open CI Ecosystem to Advance Scientific Discovery (OpenCI)

NCSA

Grant: MCB140273

NIGMS NIH HHS

Grant: R35 GM133469

National Institutes of Health

Grant: 5T32GM083937-05

Tri-Institutional Training Program in Computational Biology & Medicine

National Institutes of Health

Grant: 5T32GM008449-14

Biotechnology Predoctoral Training Program

National Institutes of Health

Grant: 5R01HS010407-03

HOSPITAL PERFORMANCE &BETA-BLOCKER USE AFTER AMI

Washington Research Foundation

Biotechnology Training Program

goldLicense: cc-by

publisherhttps://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkae231/57144003/gkae231.pdf

publisherhttps://academic.oup.com/nar/article-pdf/52/8/4466/57446469/gkae231.pdf

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC11077080/pdf/gkae231.pdf

Europe_PMChttps://europepmc.org/articles/PMC11077080

Europe_PMChttps://europepmc.org/articles/PMC11077080?pdf=render

Fields of Study

0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

ThermusEscherichia coliFluoridesMagnesiumDNA-Directed RNA PolymerasesRNA, BacterialTranscription, GeneticBase SequenceNucleic Acid ConformationBase PairingMolecular Dynamics SimulationRiboswitchRNA Folding

Keywords

RNA FoldingTranscription, GeneticBase SequenceDNA-Directed RNA PolymerasesMolecular Dynamics SimulationArticleFluoridesRNA, BacterialRiboswitchEscherichia coliNucleic Acid ConformationMagnesiumThermusMolecular BiologyBase Pairing

Sustainable Development Goals

SDG 3: 3. Good health

The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch

FAIR Checklist

Authors (9)

Funding (17 grants)

Open Access

Topics

Annotations (Europe PMC)