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A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis

Nucleic Acids Research(2024)10.1093/nar/gkae399Source: DataRank Database

A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis is a research paper published in Nucleic Acids Research (2024). On theSindex it has a DataRank of 0.390. It has been cited 7 times, with 6 citing works in its 1-hop citation network.

N/A

0.390DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access7 citations · 6 citing works in its network

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Linked data & code

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Data availability

Repositories this paper deposited data in (declared in PubMed).

PDB8S1P 8S1U

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (26 grants)Impact (FWCI 1.15)OA: goldTopics (36)IDs (PubMed, PMC, OpenAlex)Annotations (3)SDGs (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 80%Citation Network 20%

Base Score Contribution

0.312

From this paper's citation signal

Citation Network Contribution

0.0781

From 5 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 6 citers.

YebC2 resolves ribosome stalling and increases fitness of cells lacking EF-P and the ABCF ATPase YfmR
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The ribosome-associated quality control pathway supports survival in the absence of non-stop ribosome rescue factors
mBio20246 citations64 referencesContributes 0.030
Translation regulation in Bacillus subtilis and its applications in heterologous protein expression: A review
International Journal of Biological Macromolecules20255 citations134 referencesContributes 0.013
RqcH supports survival in the absence of non-stop ribosome rescue factors
bioRxiv (Cold Spring Harbor Laboratory)20241 citations63 referencesContributes 0.011
Phenotypic and whole-genome characterization of a novel Lysinibacillus fusiformis PWR01 isolated from rubber latex with multifunctional probiotic and antimicrobial potential
Microbial Pathogenesis20261 citations115 referencesContributes 0.006

Authors (14)

Helge Paternoga ORCID,Keigo Fujiwara ORCID,Jose A. Nakamoto ORCID,Esther N Park,Lyudmila Dimitrova-Paternoga ORCID

Live enrichment

PubMed:38811035 PMC:PMC11317155 OpenAlex:https://openalex.org/W4399197259

Deutsche Forschungsgemeinschaft

Grant: WI3285/11-1

Estonian Research Council

Grant: PRG335

Knut and Alice Wallenberg Foundation

Grant: 2020-0037

Swedish Research Council

Grant: 2019-01085

Swedish Research Council

Grant: 2022-01603

Swedish Research Council

Grant: 2021-01146

Crafoord foundation

Grant: 20220562

Cancerfonden

Grant: 20 0872 Pj

NIH

Grant: GM136960

JST, ACT X, Japan

Grant: JP1159335

JSPS Grants-in-Aid for Scientific Research

Grant: 20H05926

JSPS Grants-in-Aid for Scientific Research

Grant: 21K06053

JSPS Grants-in-Aid for Scientific Research

Grant: 23K05017

JSPS Grants-in-Aid for Scientific Research

Grant: 21K15020

Institute for Fermentation, Osaka

Grant: G-2021-2-063

DFG

Grant: INST 152/772-1

DFG

Grant: 152/774-1

DFG

Grant: 152/775-1

DFG

Grant: 152/776-1

DFG

Grant: 152/777-1

DFG

Grant: UHH-OAF

NIGMS NIH HHS

Grant: R01 GM136960

Knut and Alice Wallenberg Foundation

Grant: unidentified

unidentified

Universität Hamburg

Umeå Centre for Microbial Research

Centre for Structural Systems Biology, Hamburg

FWCI

1.15

Citation Percentile

0.8%

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://academic.oup.com/nar/article-pdf/52/14/8483/58782027/gkae399.pdf

publisherhttps://academic.oup.com/nar/article-pdf/52/14/8483/58782027/gkae399.pdf

journalhttps://doi.org/10.1093/nar/gkae399

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38811035

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/11317155

Fields of Study

RNA and protein synthesis mechanismsBacterial Genetics and BiotechnologyRNA modifications and cancer0301 basic medicine03 medical and health sciences

MeSH Terms

Protein DomainsBacillus subtilisBacterial ProteinsModels, MolecularProtein BindingRibosomesRNA, Transfer, Amino AcylProtein BiosynthesisRNA-Binding ProteinsCryoelectron Microscopy

Keywords

BiologyBacillus subtilisRibosomeTranslation (biology)Protein biosynthesisCell biologyGeneticsBiochemistryRNAMessenger RNAGeneBacteriaModels, MolecularCryoelectron MicroscopyRNA-Binding ProteinsRNA, Transfer, Amino AcylBacterial ProteinsProtein DomainsRNA and RNA-protein complexesRibosomesProtein Binding

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: Life in Land