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Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch

Nucleic Acids Research(2024)10.1093/nar/gkae698Source: DataRank Database

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch is a research paper published in Nucleic Acids Research (2024). On theSindex it has a DataRank of 0.594. It has been cited 25 times, with 15 citing works in its 1-hop citation network.

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0.594DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access25 citations · 15 citing works in its network

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Linked data & code

pdb

Data availability

Repositories this paper deposited data in (declared in PubMed).

PDB8V25 8V26 8V27 8V28 8G6G 8G6H 8G6Q 8G6S

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 4.12)OA: goldTopics (26)IDs (PubMed, PMC, OpenAlex)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 82%Citation Network 18%

Base Score Contribution

0.489

From this paper's citation signal

Citation Network Contribution

0.106

From 9 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 15 citers.

SET7/9 exhibits sigmoidal kinetics on nucleosomes, hyperbolic kinetics on histones by an ordered sequential mechanism, and methylates lysine and arginine
Journal of Biological Chemistry20253 citations55 referencesContributes 0.025
Structural mechanism of H3K27 demethylation and crosstalk with heterochromatin markers
Molecular Cell20253 citations67 referencesContributes 0.021
Post-translational modification of H2B C-terminal helix regulates nucleosome interactions and chromatin signaling
Nucleic Acids Research20253 citations73 referencesContributes 0.019
Role of vascular smooth muscle phenotypic transformation induced by histone modifications in the development of abdominal aortic aneurysms
Clinical Epigenetics20257 citations156 referencesContributes 0.013
EnP1 exploits H2Aub-dependent epigenetic reprogramming to promote microsporidia proliferation in host cells
PLoS Pathogens20261 citations60 referencesContributes 0.012

Authors (10)

Sanim Rahman ORCID,Susan L. Gloor ORCID,James K. Fields ORCID,Natalia Ledo Husby,Anup Vaidya ORCID

Live enrichment

PubMed:39149911 PMC:PMC11381367 OpenAlex:https://openalex.org/W4401628078

National Institute of General Medical Sciences

Grant: R35GM130393

National Cancer Institute

Grant: F31CA261154

National Cancer Institute

Grant: F31CA271743

National Institutes of Health

Grant: R43GM134834

National Institutes of Health

Grant: R44GM119893

Frederick National Laboratory for Cancer Research

Grant: HSSN261200800001E

FWCI

4.12

Citation Percentile

1.0%

Citation Trend

2025

2026

goldLicense: cc-by

journalhttps://doi.org/10.1093/nar/gkae698

publisherhttps://doi.org/10.1093/nar/gkae698

publisherhttps://academic.oup.com/nar/article-pdf/52/16/9978/59042479/gkae698.pdf

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39149911

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/11381367

Fields of Study

Genomics and Chromatin DynamicsUbiquitin and proteasome pathwaysRNA modifications and cancer

MeSH Terms

HistonesHumansNucleosomesProtein BindingProtein Processing, Post-TranslationalCryoelectron MicroscopyUbiquitinUbiquitinationMolecular Dynamics Simulation

Keywords

NucleosomeBiologyChromatinEuchromatinHistone H2BUbiquitinHistoneCell biologyChromatosomeHeterochromatinBiochemistryBiophysicsDNAGene