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STAN, a computational framework for inferring spatially informed transcription factor activity

Nucleic Acids Research(2025)10.1093/nar/gkaf1473Source: DataRank Database

STAN, a computational framework for inferring spatially informed transcription factor activity is a research paper published in Nucleic Acids Research (2025). On theSindex it has a DataRank of 0.

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 0.00)OA: goldTopics (27)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (7)

April Sagan ORCID,Bin Qin,Haoyu Wang,Elena S. Kim ORCID,Baoli Hu ORCID

Live enrichment

PubMed:41521668 PMC:PMC12784991 OpenAlex:https://openalex.org/W7119792737

National Institutes of Health

Grant: R35GM146989

Ningbo Yongjiang Talent Introduction Programme

Grant: 2022A-222-G

National Science Foundation

Grant: OCI-1053575

National Science Foundation

Grant: ACI-1445606

Extreme Science and Engineering Discovery Environment

University of Pittsburgh Center for Research Computing

FWCI

0.00

Citation Percentile

0.5%

goldLicense: cc-by-nc

journalhttps://doi.org/10.1093/nar/gkaf1473

publisherhttps://doi.org/10.1093/nar/gkaf1473

publisherhttps://academic.oup.com/nar/article-pdf/54/1/gkaf1473/66325836/gkaf1473.pdf

repositoryhttps://pubmed.ncbi.nlm.nih.gov/41521668

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC12784991/

Fields of Study

Single-cell and spatial transcriptomicsBioinformatics and Genomic NetworksGene Regulatory Network AnalysisMedicineComputer ScienceBiology

MeSH Terms

Spatial TranscriptomicsBreast NeoplasmsFemaleGlioblastomaHumansRNA, MessengerSoftwareTranscription FactorsPrefrontal CortexComputational BiologyGene Expression ProfilingGene Regulatory NetworksTranscriptome

Keywords

Transcription factorTranscriptomeGene regulatory networkRegulation of gene expressionGene expressionSystems biologyGene expression profilingCell