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APPRIS 2017: principal isoforms for multiple gene sets

Nucleic Acids Research(2018)10.1093/nar/gkx997Source: DataRank Database

APPRIS 2017: principal isoforms for multiple gene sets is a research paper published in Nucleic Acids Research (2018). On theSindex it has a DataRank of 5.6. It has been cited 166 times, with 149 citing works in its 1-hop citation network.

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5.6DataRank · unranked

Scored on demand from live citation data

166 citations · 149 citing works in its network

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Linked data & code

uniprot pdb

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (3 grants)Impact (FWCI 4.66)OA: goldTopics (52)Linked Datasets (10)DataCite Reuse (10)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (2)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (0/2)

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

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DataRank Breakdown

Base Score 14%Citation Network 86%

Base Score Contribution

0.768

From this paper's citation signal

Citation Network Contribution

4.8

From 126 citing papers with measurable signal

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Authors (6)

Juan Rodriguez-Rivas,Tomás Di Domenico ORCID,Jesús Vázquez ORCID,Alfonso Valencia,Michael L Tress

Live enrichment

PubMed:29069475 PMC:PMC5753224 OpenAlex:https://openalex.org/W2766459919

NHGRI NIH HHS

Grant: U41 HG007234

National Institutes of Health

Grant: 5U41HG007234-04

GENCODE: comprehensive gene annotation for human and mouse

National Institutes of Health

Grant: 5U41HG007234-08

GENCODE: comprehensive genome annotation for human and mouse

FWCI

4.66

Citation Percentile

1.0%

Influential Citations

Citation Trend

2018

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2021

2022

2023

2024

2025

2026

goldLicense: other-oa

journalhttps://academic.oup.com/nar/article-pdf/46/D1/D213/23162962/gkx997.pdf

GOLDhttps://academic.oup.com/nar/article-pdf/46/D1/D213/23162962/gkx997.pdf

publisherhttps://academic.oup.com/nar/article-pdf/46/D1/D213/23162962/gkx997.pdf

publisherhttp://academic.oup.com/nar/article-pdf/46/D1/D213/23162962/gkx997.pdf

journalhttps://doi.org/10.1093/nar/gkx997

Fields of Study

RNA and protein synthesis mechanismsRNA Research and SplicingRNA modifications and cancerComputer ScienceMedicineBiology0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

Amino Acid SequenceAnimalsHumansModels, MolecularProtein ConformationReproducibility of ResultsSequence AlignmentAlternative SplicingProtein IsoformsProteomeDatabases, GeneticMolecular Sequence Annotation

Keywords

EnsemblUniProtRefSeqGene isoformComputational biologyBiologyGenespliceGeneticsBioinformaticsGenomicsGenomeModels, MolecularProteomeProtein ConformationProteinsReproducibility of ResultsMolecular Sequence AnnotationÀrees temàtiques de la UPC::Enginyeria biomèdicaEnginyeria de proteïnesAlternative SplicingDatabases, GeneticDatabase IssueAnimalsHumansProtein IsoformsProtein engineeringAmino Acid SequenceGENCODE consortiumAPPRIS databaseSequence Alignment

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: Life in Land

Additional file 1 of Nanopore sequencing reveals endogenous NMD-targeted isoforms in human cells

10.6084/m9.figshare.15178683.v1figshare

Additional file 1 of Nanopore sequencing reveals endogenous NMD-targeted isoforms in human cells

10.6084/m9.figshare.15178683figshare

Additional file 3 of Nanopore sequencing reveals endogenous NMD-targeted isoforms in human cells

10.6084/m9.figshare.15178689.v1figshare

Additional file 3 of Nanopore sequencing reveals endogenous NMD-targeted isoforms in human cells

10.6084/m9.figshare.15178689figshare

Additional file 1 of Identifying novel transcript biomarkers for hepatocellular carcinoma (HCC) using RNA-Seq datasets and machine learning

10.6084/m9.figshare.16456542.v1figshare