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Reconstructing tumor evolutionary histories and clone trees in polynomial-time with SubMARine

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.11.146100Source: DataRank Database

Reconstructing tumor evolutionary histories and clone trees in polynomial-time with SubMARine is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2020). On theSindex it has a DataRank of 0. It has been cited 2 times.

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Open Access2 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (3 grants)OA: greenTopics (34)IDs (PubMed, OpenAlex)SDGs (2)

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Open Access

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Reusable (0/3)

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Authors (5)

Jeff Wintersinger ORCID,Gunnar Rätsch ORCID,Jens Stoye ORCID,Quaid Morris ORCID,Linda K. Sundermann ORCID

Live enrichment

PubMed:21097893 OpenAlex:https://openalex.org/W3035720628

National Institutes of Health

Grant: 2P30CA008748-43

MOUSE GENETICS

Natural Sciences and Engineering Research Council of Canada

Grant: unidentified

unidentified

Deutsche Forschungsgemeinschaft

Grant: 221270173/GRK 1906

Computational Methods for the Analysis of the Diversity and Dynamics of Genomes

greenLicense: cc-by

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2020/06/12/2020.06.11.146100.full.pdf

repositoryhttps://doi.org/10.1101/2020.06.11.146100

repositoryhttp://hdl.handle.net/20.500.11850/464962

repositoryhttp://hdl.handle.net/20.500.11850/467206

Fields of Study

Cancer Genomics and DiagnosticsGene expression and cancer classificationGenetic factors in colorectal cancer0301 basic medicine0206 medical engineering02 engineering and technology03 medical and health sciences

Keywords

clone (Java method)Pairwise comparisonTree (set theory)BiologyComputational biologyComputer scienceMathematicsGeneticsCombinatoricsGeneArtificial intelligenceWhole Genome SequencingQH301-705.5clone tree reconstructionsHigh-Throughput Nucleotide Sequencingtumor heterogeneity; tumor evolutionary histories; clone tree reconstructions; uncertaintyEvolution, Moleculartumor evolutionary historiesNeoplasmsMutationtumor heterogeneityHumansComputer SimulationBiology (General)uncertaintyAlgorithmsResearch Article

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: Life below water