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Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.10.434828Source: DataRank Database

Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2021). On theSindex it has a DataRank of 0. It has been cited 8 times.

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Open Access8 citations

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bioproject gen refseq

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (10 grants)OA: greenTopics (49)IDs (PubMed, OpenAlex)Annotations (3)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (24)

Rose M. Langsjoen ORCID,Brooke Mitchell ORCID,Barbara M. Judy ORCID,Patrick C. Newman,Jessica A. Plante ORCID

Live enrichment

PubMed:33758846 OpenAlex:https://openalex.org/W3133980622

National Institutes of Health

Grant: 5R21AI151725-02

Defective viral RNAs promote a pro-viral stress response via host non-coding RNAs

National Institutes of Health

Grant: 5R01AI153602-03

Identifying host and viral correlates for coronavirus pathogenesis

National Institutes of Health

Grant: 5TL1TR001440-08

NRSA Training Core

National Institutes of Health

Grant: 5R24AI120942-05

World Reference Center for Emerging Viruses and Arboviruses (WRCEVA)

NIAID NIH HHS

Grant: R01 AI153602

NCATS NIH HHS

Grant: TL1 TR001440

NIAID NIH HHS

Grant: U54 AI150472

NIAID NIH HHS

Grant: R24 AI120942

NIAID NIH HHS

Grant: R21 AI151725

NIAID NIH HHS

Grant: U01 AI151801

greenLicense: cc-by-nd

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2021/09/01/2021.03.10.434828.full.pdf

GREENhttps://doi.org/10.7554/elife.68479

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2021/09/01/2021.03.10.434828.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2021.03.10.434828

repositoryhttps://doi.org/10.1101/2021.03.10.434828

Fields of Study

SARS-CoV-2 and COVID-19 ResearchViral gastroenteritis research and epidemiologyBacteriophages and microbial interactionsBiologyMedicine0301 basic medicine03 medical and health sciences0303 health sciences

Keywords

AmpliconBiologyNanopore sequencingComplementary DNAGenomeGeneticsPrimer (cosmetics)Computational biologyGenomicsMassive parallel sequencingDNA sequencingReverse transcriptaseRNAPolymerase chain reactionDNAGeneNext-Generation SequencingDNA, ComplementaryQH301-705.5ScienceGenome, ViralArticleNanoporesHumansRNA, MessengerBiology (General)Gene LibraryRecombination, GeneticBase SequenceWhole Genome SequencingSARS-CoV-2Defective RNAsQRCOVID-19High-Throughput Nucleotide SequencingGenetics and GenomicsCoronavirusClickSeqMedicineRNA, Viral

Sustainable Development Goals

SDG 3: 3. Good health

Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants

FAIR Checklist

Authors (24)

Funding (10 grants)

Open Access

Topics

Annotations (Europe PMC)