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STRling: a k-mer counting approach that detects short tandem repeat expansions at known and novel loci

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.18.469113Source: DataRank Database

STRling: a k-mer counting approach that detects short tandem repeat expansions at known and novel loci is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2021). On theSindex it has a DataRank of 0. It has been cited 8 times.

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (9 grants)OA: greenTopics (23)IDs (PubMed, OpenAlex)

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Authors (14)

Brent S. Pedersen ORCID,Laurel Hiatt ORCID,Joe Brown ORCID,Sarah J. Beecroft ORCID,Gianina Ravenscroft ORCID

Live enrichment

PubMed:19276002 OpenAlex:https://openalex.org/W3215694637

National Institutes of Health

Grant: 1OT3HL147154-01

NHLBI Data Stage Coordinating Center

National Institutes of Health

Grant: 1OT3HL142481-01

The Integration of Trans-omics for Precision Medicine (TOPMED) and Other Heart, Lung, Blood and Sleep (HLBS) Data Sets with the Data Commons

National Institutes of Health

Grant: 1OT3HL142480-01

The Integration of Trans-omics for Precision Medicine (TOPMED) and Other Heart, Lung, Blood and Sleep (HLBS) Data Sets with the Data Commons

National Institutes of Health

Grant: 1OT3HL142478-01

The Integration of Trans-omics for Precision Medicine (TOPMED) and Other Heart, Lung, Blood and Sleep (HLBS) Data Sets with the Data Commons

National Institutes of Health

Grant: 1S10OD021644-01A1

From genomics to natural language processing: A protected environment for research computing in the health science

National Institutes of Health

Grant: 5R01HG010757-02

Scalable detection and interpretation of structural variation in human genomes

National Institutes of Health

Grant: 5R01GM124355-03

Software for exploring all forms of genetic variation in any species

National Health and Medical Research Council (NHMRC)

Grant: 1117510

Improving outcomes for individuals and families affected by genetic disease.

National Institutes of Health

Grant: 1OT3HL142479-01

The Integration of Trans-omics for Precision Medicine (TOPMED) and Other Heart, Lung, Blood and Sleep (HLBS) Data Sets with the Data Commons

greenLicense: cc-by-nd

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2021/11/20/2021.11.18.469113.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2021.11.18.469113

repositoryhttps://doi.org/10.1101/2021.11.18.469113

repositoryhttps://research-repository.uwa.edu.au/en/publications/743ece37-ef77-446b-99d0-83ee16a62107

Fields of Study

Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsGenetic Neurodegenerative Diseases0301 basic medicine0303 health sciences03 medical and health sciences

Keywords

MicrosatelliteGenomeBiologyGeneticsComputational biologyHuman genomeTandem repeatDNA sequencingDNAGeneQH301-705.5MethodHigh-Throughput Nucleotide SequencingSequence Analysis, DNABiology (General)QH426-470Microsatellite Repeats